Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00239 ATGGTTTCTCCCGAAAACTCTAATTGGCTCTTCGATTATGGCTTGATCGATGACATCGCCGTTCCAGGCGGAGATTTTACGGCGCCGGCCACCGGATTTCACTGGCCTTCCCAAGCCTTGAACGGTTCTACAAGTGTCAGTGTTGAAATTGATGGCTCCTTTGGGGATTCAGATGGACTTAAGGAAATAGGCTCCCGAAAACGGGTGAGGTCTGAAGCATGCAATGCATCTGGCTCGAAAGCTTGTAGAGAGAAAATGCGGAGGGATAGGCTGAATGACAGGTTCCTGGAATTGGGTTCCATCCTGGAGCCTGGAAGGCCACCCAAAATGGACAAGGCTGCTATATTGAGTGATGCTGTCCGTATGGTGACTCAGTTACGGAGTGAAGCCCAGAAGCTGAAGGAGTCGAATGAGAATCTCCAGGAGAAGATTAAAGAGTTGAAGGCTGAGAAGAATGAGCTTCGTGATGAAAAACAGAGGCTAAAGGTAGAGAAGGAGAAGCTGGAGCAGCAAGTCAAAGCCACGAGTGCTCAACCAGGCTTCCTGCCCCACCCTTCTGCAATCCCGGCTGCCTTTGCTGCACAAGGCCAAGCAGCTGGCAACAAGCTGATGCCATTCATTGGCTACCCTGGTGTTGCCATGTGGCAATTCATGCCGCCTGCTGCAGTTGATACTTCTCAGGATCATGTTCTCCGGCCCCCAGTTGCCTAA 711 0.512 MVSPENSNWLFDYGLIDDIAVPGGDFTAPATGFHWPSQALNGSTSVSVEIDGSFGDSDGLKEIGSRKRVRSEACNASGSKACREKMRRDRLNDRFLELGSILEPGRPPKMDKAAILSDAVRMVTQLRSEAQKLKESNENLQEKIKELKAEKNELRDEKQRLKVEKEKLEQQVKATSAQPGFLPHPSAIPAAFAAQGQAAGNKLMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00239 236 PANTHER BHLH TRANSCRIPTION FACTOR 4 236 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Eupl02g00239 236 FunFam Transcription factor bHLH34 66 124 - -
Eupl02g00239 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Eupl02g00239 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
Eupl02g00239 236 CDD bHLH_AtILR3_like 80 155 - -
Eupl02g00239 236 Coils Coil 116 178 - -
Eupl02g00239 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Eupl02g00239 236 Gene3D - 79 155 IPR036638 GO:0046983
Eupl02g00239 236 SMART finulus 81 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00239 Eupl-Chr2 2840381 2850208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00239 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 69.038 2.15e-110 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl02g00239 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00239 - - nnu:104604927 388.267