Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00224 ATGGGGTGTGATGTACCCCTGAGAACAGAGAGGAAGAAGAAGAAGAAGAAGATGCCAACAGTTTGGTTTTCCCTAAAGAGGTCTCTCCATTGCAAATCGGAGCCATCAGATGTTCATGATCCAAAGGCCGGGAATAATTTGAGCTCTATCTTGACAAGAAAAACAGGTAGGTCTGGTTGTTCGAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAGAGACACTTCGAAAAGCCTCCAAGTTGTAGCCCAAGATCTATTGGGAGCAGTGAATTTCTCAATCCAATAACCCATGAAGTGATCCTCAGTAATTCCAGGTGTGAGCTTAAGATAACTGGATTTGGCGGTTTCCATGAAGATGATGGTGGTGGGGGTGGGTGTGGTGGTGGGGATGGTACCGGTGGTGGCTCAACCTTTGTCGGTACCCTAAGACCTGGAACACCTGGCCCGGGAGGGCACCACACCATGCACCATTATAACACTTCTTTTAGGAGCTCAGCCACCCCTCCAAGGAAGTCTCCTAGTTTTCTCCCTGATAGAGAAGGCTCTGGATTTGGAGGTTCTGCTATATTTGGTCGTGGTGGTGGTGGTGGTGGTGGTGGTATTACTTCGAACCCCAGGGCCTTTCATGATGTAGATTCAAATGGGTCTTCGACTGTCACTTGCCATAAATGTGGAGAACAGTTTGGGAAGTGGGAAGCAGTAGAAGCACATCATCTCTCCAAGCATGCAGTTACTGAACTTGTTGAAGGAGACTCATCTCGGAAAATTGTAGAGATAATTTGCCGGACAAGCTGGTGTAAGTCTGAGAATGGTTGTGGGCGGATTGAAAGGGTTTTGAAGGTCCATAATATGCAAAAGACCCTTGCTCGGTTCGAGGAATACAGGGAGATGGTGAAGATCAAAGCCAGCAAACTCCCCAAGAAACACCCCCGTTGCCTAGCTGATGGGAATGAACTGTTGAGGTTCCATGGGACAACCGTGGCGTGCTCTCTCGGCATGAGTGGCTCTTCCAACCTATGTGTATCAGAAAAGTGCAGCGTCTGTCGGATTATAAGACACGGGTTCTCCACCAAGAAGGAGCTCAAGGGTGGTATTGGCGTTTTCACAACTTCGACGAGTGGAAGAGCCTTTGAGTGTATTGAACTCTATGAAGAAAATCCATCTGTAAGGAAGGCATTGATAGTCTGTAGAGTGATCGCCGGGAGGGTCCATAGGCCATTGGAGAACTTCCAAGAACTTGCTGGTCAATCGGGGTTTGACTCATTGGCTGGGAAGGTTGGTCTTTATTCAAATATTGAGGAGCTCTATTTACTCAACCCCAGAGCTCTCCTTCCTTGTTTTGTGGTAATCTGTAAACCCTGA 1371 0.4763 MGCDVPLRTERKKKKKKMPTVWFSLKRSLHCKSEPSDVHDPKAGNNLSSILTRKTGRSGCSRSIANLKDVIHGSKRHFEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFHEDDGGGGGCGGGDGTGGGSTFVGTLRPGTPGPGGHHTMHHYNTSFRSSATPPRKSPSFLPDREGSGFGGSAIFGRGGGGGGGGITSNPRAFHDVDSNGSSTVTCHKCGEQFGKWEAVEAHHLSKHAVTELVEGDSSRKIVEIICRTSWCKSENGCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFHGTTVACSLGMSGSSNLCVSEKCSVCRIIRHGFSTKKELKGGIGVFTTSTSGRAFECIELYEENPSVRKALIVCRVIAGRVHRPLENFQELAGQSGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00224 456 FunFam C2H2-like zinc finger protein 246 455 - -
Eupl02g00224 456 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 21 454 - -
Eupl02g00224 456 Gene3D - 238 455 - -
Eupl02g00224 456 ProSitePatterns Zinc finger C2H2 type domain signature. 224 245 IPR013087 -
Eupl02g00224 456 SUPERFAMILY ADP-ribosylation 247 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00224 Eupl-Chr2 2731358 2734787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00224 18 456 C2H2 Transcription Factor Family AT5G54630 65.254 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl02g00224 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00224 - - nnu:104604941 727.628