Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00221 ATGAAAGGCGTATCATGGGGGCTGATAATTGGGATTTCCATAGGAGTGATAATTGGAGTTCTTTTGGCTATTTCAACTTTGTTTTTTATTAGGTACCGCAAGAGGTGTTCACAGATTGGGAACAGCAGTTCTCGAAGAGCGGCAAACATTCCTATCCGTGCTAATGGCATTGATCCTTGTACAATACTGTCGGACTCGACCATTGGTCAGGAATCACCCAAACCTTCTGAAGGGAATGGCATGTTCTTGTGGCTCGAAGGGCCTAAGAGGAAGAATATGTTATCTGTGTCTGGAATACCCAAGTATTCTTACAAGGATCTGCAGAAAGCAACTTATAATTTTACAACAATGATAGGGCAAGGGGCATTTGGTCCTGTTTATAAAGCTCAGATGTCAACTGGCGAGACTGTCGCGGTTAAAATGCTTGCTACTGATTCTAAGCAAGGGGAAAAGGAATTCCAAACAGAGGTTCTATTACTTGGGAGATTACATCACAGAAACCTTGTGAATTTGGTGGGATATTGTGCAGAAAAAGGCCAGCATATGCTTGTATATGTGTACATGAGTAATGGCAGTCTAGCTTCTCATTTATATAGTGAAAAACATGAATCATTGAGCTGGGATTTGAGAGTTTATATAGCTCTAGATGTAGCAAGGGGTTTGGAGTATCTTCATGATGGGGCTGTTCCACCCGTAGTCCACCGGGACATCAAGTCTTCCAACATACTGTTGGATCAGTCCATGAGAGCCAGAGTGGCTGATTTTGGGCTTTCAAGGGAAGAAATGGTTAATCCACATGCATCTAATGTTAGGGGAACTTTCGGCTATCTCGATCCTGAGTATATATCAACAAGAGCCTTCACGAAGAAAAGCGACATCTACAGTTTCGGAGTCTTGCTCTTTGAACTTATTGCAGGCAGGAATCCTCAACAGGGTCTCATGGAATATGTTGAGCTAGCGGCAATGAATACAGAGGGAAGAGTTGGGTGGGAGGAGATTGCGGATTCCCGACTTGAAGGGAAATTCGAGCTGCAAGAACTCAATGATGTGTCAGCCCTTGCATACAAATGCATCAACCGTGTCTCGAGAAAGCGGCCTTCTATGAGGGACATCGTGCAGGCACTGTGTCGGATTGTTAAGTTGAGACACAGTAAAAAGAATCACAAACGAGCCTTGTCTGTTACTACAGAGGAGGAGGTTGTCATTGATGTCGACCAATCAGAGACTCAAATTCCAATCAATGAACATAGGAGAGAGGAATCGATAGACAGCACATTGGACCCACCTGAAATTTGA 1296 0.4367 MKGVSWGLIIGISIGVIIGVLLAISTLFFIRYRKRCSQIGNSSSRRAANIPIRANGIDPCTILSDSTIGQESPKPSEGNGMFLWLEGPKRKNMLSVSGIPKYSYKDLQKATYNFTTMIGQGAFGPVYKAQMSTGETVAVKMLATDSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGSLASHLYSEKHESLSWDLRVYIALDVARGLEYLHDGAVPPVVHRDIKSSNILLDQSMRARVADFGLSREEMVNPHASNVRGTFGYLDPEYISTRAFTKKSDIYSFGVLLFELIAGRNPQQGLMEYVELAAMNTEGRVGWEEIADSRLEGKFELQELNDVSALAYKCINRVSRKRPSMRDIVQALCRIVKLRHSKKNHKRALSVTTEEEVVIDVDQSETQIPINEHRREESIDSTLDPPEI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00221 431 MobiDBLite consensus disorder prediction 411 425 - -
Eupl02g00221 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 232 244 IPR008271 GO:0004672|GO:0006468
Eupl02g00221 431 FunFam calcium/calmodulin-regulated receptor-like kinase 1 188 397 - -
Eupl02g00221 431 ProSiteProfiles Protein kinase domain profile. 112 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00221 431 SMART serkin_6 112 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00221 431 Pfam Protein tyrosine and serine/threonine kinase 114 375 IPR001245 GO:0004672|GO:0006468
Eupl02g00221 431 PANTHER OS01G0750732 PROTEIN 3 385 - -
Eupl02g00221 431 CDD STKc_IRAK 118 378 - -
Eupl02g00221 431 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 86 187 - -
Eupl02g00221 431 MobiDBLite consensus disorder prediction 411 431 - -
Eupl02g00221 431 Gene3D Transferase(Phosphotransferase) domain 1 188 402 - -
Eupl02g00221 431 Gene3D Phosphorylase Kinase; domain 1 86 187 - -
Eupl02g00221 431 SUPERFAMILY Protein kinase-like (PK-like) 100 381 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00221 Eupl-Chr2 2707290 2715192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00221 98 375 Receptor kinase-like Gene Family AT3G19300 43.816 1.10e-73 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Eupl02g00221 PK_Tyr_Ser-Thr 2.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00221 - - nnu:104604947 711.064