Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00220 ATGGATTTACACCAGATTTTAAGGTACAGCATGACTGGTGCAAACCTATCCTATGGATTTTCTCAGGACACTATTCCCCCAATCTCTGAATGGATGATTGGGCCCATGAAATTTGACTTGGGGAGCTCCCCTAACTCGCCTCTTCTCACTCACTTCGACTCCGACACCTTTACTACATTGAGCAACAGCCAGGAGCAGTACAGCCCTTCCTGTAACTCTTCATTAGAGATCAACAGTTCTTTCCATCGGATCAGCCCTTCCCCAATTCATTTTCGAGAAGGTCTTCAGCTTTCTTCCGGTGGGAGTCCAGTTTCGCAGGATGCGAATTGCGGTCAGAGAATGAAGCATGCTCTACTGGAATTAGAAACTGCTCTATTGGGCCCTGACACTGAGGAAGACAAAACAACTATTCTCAATCTTGCATCTGAAGGAAATAAGAACGCACAAATTTTGAGTCCAAGATCAAGGGCCTGGAGTCGAGGGTCGCATGTGATTCGACCTCAACCATGCACTACTGCCAAGTATATGAAGTCGAGCCATGGAGTTCCAGCAGAGAAACGCCATAGAAAAACAGAGGCATTGTCTCAGGAAATTCCACGGGGAGGTCTTAAACAGTTGCTGATCCAATGTGCAAAGGCTCTCTGTGAGAACAGGATGAATGATTTCGAGAAGTTGATTGAAGAGGCAAGGGGTGCTGTATCCATTAGCGGAGAACCAATCCAGCGTCTTGGTGCTTACATGGTAGAAGGGCTGGTGGCGAGGAAAGAGGCGTCAGGCACCAAAATCTACCGTGCACTGAGGTGTAGAGAACCAGAAAGCAGTGACCTGCTCTCATACATGCATATTCTGTATGAAATCTGCCCATACTTCAAGTTTGGTTACATGGCAGCCAATGGAGCGATTGCCGAAGCGTTCAGAAACGAGGATCGAGTGCACATCATAGATTTCCAGATTGCTCAAGGGACACAGTGGATGACTCTGATACAAGCGCTGGCAGCGAGGCCAAGTGGGCCCCCTCATGTGCGAATCACGGGGATCGATGACCCAGTCTCTAAGTATGCTCGGGGTGACAGTTTAGAGGTGGTTGGGAAGAAATTGGCTGAAATGTCGGAGAAATTTAAAATCCCTGTCGAGTTCCATGCAGTACCAGTCTTTGCGCCGGAGGTCACTCGAGAGATGCTTGATGTAAGGCCAGGGGAGGCTTTGGCCGTCAATTTCACCCTGCAGCTCCACCACACCCCGGATGAGAGTGTTGATGTGAACAACCCAAGAGACGGGCTGCTAAGGATGGTGAGGTCACTGTCACCTAAAGTGACCACCCTAGTTGAGCAGGAGTCAAACACAAATACAACCCCATTCTTCACAAGATTTATAGAGACCCTGGACTTTTACTCTGCCATGTTCGAGTCCATCGACGTGACCCTGCCGAGGGACAGAAAGGAGCGAATCAGTGTGGAACAGCACTGCCTGGCGAGGGATATCGTGAACATCATTGCGTGCGAGGGGAAGGAGAGGGTGGAAAGGCATGAACTGCTGGGAAAGTGGAAGTCGAGGTTGACAATGGCAGGGTTCCGGCCGTACCCACTGAGCTCATATGTGAACTCTGTTATAAGGAGTTTGCTGAGGTGTTACTCAGAGGAATATACACTGGTGGAGAAGGATGGAACCTTGCTGTTGGGCTGGAAGGACAGGAACTTGATCTCCGCTTCTGCGTGGCACTGA 1722 0.4954 MDLHQILRYSMTGANLSYGFSQDTIPPISEWMIGPMKFDLGSSPNSPLLTHFDSDTFTTLSNSQEQYSPSCNSSLEINSSFHRISPSPIHFREGLQLSSGGSPVSQDANCGQRMKHALLELETALLGPDTEEDKTTILNLASEGNKNAQILSPRSRAWSRGSHVIRPQPCTTAKYMKSSHGVPAEKRHRKTEALSQEIPRGGLKQLLIQCAKALCENRMNDFEKLIEEARGAVSISGEPIQRLGAYMVEGLVARKEASGTKIYRALRCREPESSDLLSYMHILYEICPYFKFGYMAANGAIAEAFRNEDRVHIIDFQIAQGTQWMTLIQALAARPSGPPHVRITGIDDPVSKYARGDSLEVVGKKLAEMSEKFKIPVEFHAVPVFAPEVTREMLDVRPGEALAVNFTLQLHHTPDESVDVNNPRDGLLRMVRSLSPKVTTLVEQESNTNTTPFFTRFIETLDFYSAMFESIDVTLPRDRKERISVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFRPYPLSSYVNSVIRSLLRCYSEEYTLVEKDGTLLLGWKDRNLISASAWH* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00220 573 ProSiteProfiles GRAS family profile. 194 573 IPR005202 -
Eupl02g00220 573 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 148 569 IPR005202 -
Eupl02g00220 573 Pfam GRAS domain family 203 572 IPR005202 -
Eupl02g00220 573 Coils Coil 212 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00220 Eupl-Chr2 2684103 2688509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00220 196 572 GRAS Transcription Factor Family AT5G48150 65.873 0.0 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl02g00220 GRAS 3.7e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00220 - - nnu:104604948 875.544