Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00219 ATGGAGCGAGATTTTCCATCGACATTCATATCTGAAGGATCTGGCTTTCTGTTTACGGCTTTCAACGGCCAGACCACTGAACAACGATCCTTCAACACAAGTTTTTCTGCATTTTCTAGCGTAAATCACGAGAAAACGCCGTTTCACGGAGCCGATTATGGCATCGGAACTTCTCTGTTCGGATTTCCGACAATCTCGACTTCAGATCCGGTGGCTTTCAGCGACTTCCATGAAAATATGACGGAGTTTCAGCAAAAACAGCTGAACGAAAGCTCAATCAACGGAGATCGATTTCTGAAATCGATCGACATTGATTCGGAGAAACTCAGATTCCCCAAACCCGAACCGGTCGACGAAGAATGGATAAATGGTACCTCAATCGAACCGTTCAACTCGAGATCCGAAAACTATAATCGGACTTTGAATCCCTGCAACTCGAGCATTTATCAGTTACCATATCTTCGTTCTCTCGAACAGGTCTCCCTTCATCATGGAGAACAAACTCCGTGCACAGAAGATTTGTCCGTTGTCGAATCTTCACTTAAGCGTTTGCGATCATCATCATCGACTGATTCATACACGCTCGAGGCAATCGTGAGAAACATTCCCCTATCAACCCCTAGTTCCTTCGCTTCCCTTAAAGCACCAAACCCTGCAGCTCCGTCAGTAATCCCTCAAAGCGTGTTGGCTCGGCAGCGGCGCAAAATGATAAGCGATCGGACTCGGTGTCTCCAAAAGCTGATGCCGTGGGACAGAAAGATGGACATGGCGACGTTGCTGGAAGAGGCTTACAAGTACATCAAGTACCTTCAGGCGCAGGTTAGCGTGCTTCAGTCGATGCCTTTGCAGACGAGCTTCACCGCGTCTCAGGTGCCTGTTAATGTCGGTGGTGTGTTTGGTGGGTTGGAAAAGCTGAATCGACAGCAGCTGCTTCAGGTGCTGGTGAACTCTCCGGTGGCTCAGACAGTTTTGTACTCTCAAGGATGTTGTGTGTACTCGTTGGAGCAATTGCTTTTGCTGAAGAAGATCGCTGCGAAGAAGATTCTTCTGTGA 1053 0.4786 MERDFPSTFISEGSGFLFTAFNGQTTEQRSFNTSFSAFSSVNHEKTPFHGADYGIGTSLFGFPTISTSDPVAFSDFHENMTEFQQKQLNESSINGDRFLKSIDIDSEKLRFPKPEPVDEEWINGTSIEPFNSRSENYNRTLNPCNSSIYQLPYLRSLEQVSLHHGEQTPCTEDLSVVESSLKRLRSSSSTDSYTLEAIVRNIPLSTPSSFASLKAPNPAAPSVIPQSVLARQRRKMISDRTRCLQKLMPWDRKMDMATLLEEAYKYIKYLQAQVSVLQSMPLQTSFTASQVPVNVGGVFGGLEKLNRQQLLQVLVNSPVAQTVLYSQGCCVYSLEQLLLLKKIAAKKILL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00219 350 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 96 342 IPR045843 GO:0003700|GO:0006355
Eupl02g00219 350 SMART finulus 227 276 IPR011598 GO:0046983
Eupl02g00219 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 221 270 IPR011598 GO:0046983
Eupl02g00219 350 Pfam Helix-loop-helix DNA-binding domain 231 271 IPR011598 GO:0046983
Eupl02g00219 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 226 286 IPR036638 GO:0046983
Eupl02g00219 350 Gene3D - 226 290 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00219 Eupl-Chr2 2679991 2681466 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00219 233 344 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 51.327 7.46e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl02g00219 HLH 0.00024 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00219 - - nnu:104585742 263.848