Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00193 ATGGCAGAAGAATTTCAGTCTGGGATTTGCAGTGGAAACTGGTGGAATTCAGAAAGAAGCGGATTCAACGGGGGATCGTCATCGTGCACGACGGCTCTCACTGATATCGGAAGCTACGGATGGCCTACTGAGATGGTGGAGATGAAGGTGAGATCTTGCGAGGAGTCAACTTCAGTTTCTGGTAGTTCTATTGTTTTCCAAGATACACAGAAACCCCAAGGCTCAGATTCTGTTGGTGGGGGTGGTGCCGTTTTAATGGATTCAACCTTACAAATGATGGGTTTCGGCCTTTCATCACCAACAACTGATTGGAACCAGCAACAAGCTTTATTTAGTCGAAGTAGTGGAAGAGCCGAGGGCAATTTTCATTCCATGATTCAAGAAGACTTAAGTTCGAGGTCGTCGAATTTTCGACAAGAAACTGGGATGGAATCTGTTCATCAAGAACAAAAGGACTGGAGTGCAAAGAATTTTTCTGCAAGTGGTGAAAATTCCTCAGTTGACGAGTTTAAGCAAATAAATCAGGGCTTACCCATGAATTTTTCGATGGGTTCCGCTTCATACGGATGCCCTTCGACGTTATTTCAAGGTTTTTTTGAACCTGATCCTCAACCCCAACAACCTCCTTATGATAACCGAACAATGAACTATCCATCTCCCACAAATTACCGCATGAATTCGAACGAATTGCCGCCTTCTTGGCAAAAATTCCCTCAGTCGTCGTCCCTTAAAACTTCACCTCCGAAGCAGCAACCCATTAATCAGTTGCACTTCTCCAACAACGCTCCGTTCTGGAAAGCCTCAGCAGCAGCAGCAGCAGCAGCAGCCATGAATGATGTTCGATCCAGCTTTTTCCCTTTGCCGCAGAATCAGTTTCAGTCATCAGCTTTTGAAGAAAAACCAAATTGCAGTAATAACCTCATCATGAAGCCCAATACAGAAGAAGTTCGTGACTCAGGCTCAATGGTGAAGAAAAGTAGCGGTGAACCTACATTCAAAAGGCCTCGAATTGAAACGCCATCACCATTACCAACTTTTAAGGTCCGGAAAGAGAAGCTAGGAGACAGAATCACTGCCCTCCAGCAATTGGTTTCTCCTTTCGGGAAGACTGATACGGCGTCTGTGCTCTTTGAAGCTATTGAGTACATCAAGTTCCTCCATGAACAAGTCACTGTTTTAAGTAATCCATATATGAAGAATGGACCTCCAATACAACATCATCAGAATTCTAATAAATCGAAGGTCGACCCAGAAGGACCCAAACAAGATCTTAGAAGCCGCGGTTTGTGTTTGGTGCCGATTTCGAGCACTTACCCAGTTACTAACGAGACCAGCGCAGATTTTTGGACGCCCACATTTGGAGGAAGTTACAGGTAG 1377 0.4473 MAEEFQSGICSGNWWNSERSGFNGGSSSCTTALTDIGSYGWPTEMVEMKVRSCEESTSVSGSSIVFQDTQKPQGSDSVGGGGAVLMDSTLQMMGFGLSSPTTDWNQQQALFSRSSGRAEGNFHSMIQEDLSSRSSNFRQETGMESVHQEQKDWSAKNFSASGENSSVDEFKQINQGLPMNFSMGSASYGCPSTLFQGFFEPDPQPQQPPYDNRTMNYPSPTNYRMNSNELPPSWQKFPQSSSLKTSPPKQQPINQLHFSNNAPFWKASAAAAAAAAMNDVRSSFFPLPQNQFQSSAFEEKPNCSNNLIMKPNTEEVRDSGSMVKKSSGEPTFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLFEAIEYIKFLHEQVTVLSNPYMKNGPPIQHHQNSNKSKVDPEGPKQDLRSRGLCLVPISSTYPVTNETSADFWTPTFGGSYR* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00193 458 FunFam Transcription factor bHLH123 family 347 409 - -
Eupl02g00193 458 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 337 386 IPR011598 GO:0046983
Eupl02g00193 458 MobiDBLite consensus disorder prediction 195 251 - -
Eupl02g00193 458 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 405 IPR036638 GO:0046983
Eupl02g00193 458 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 145 438 - -
Eupl02g00193 458 MobiDBLite consensus disorder prediction 209 251 - -
Eupl02g00193 458 CDD bHLH_AtbHLH_like 343 394 IPR045239 -
Eupl02g00193 458 Gene3D - 347 401 IPR036638 GO:0046983
Eupl02g00193 458 MobiDBLite consensus disorder prediction 315 343 - -
Eupl02g00193 458 MobiDBLite consensus disorder prediction 397 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00193 Eupl-Chr2 2333779 2336532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00193 1 455 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 40.299 3.60e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00193 - - nnu:104604971 592.808