Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00187 ATGAGAAATATCACTGCTCTGCATTTTTGGCTTGTTTTCTGCCTCACTTTCTTCTCAAAATTTTCCATTGCAATCGATACCATAACTCCAACTCAATCAATCAGAGATGGACAAACCGTTGTTTCAGCCGGGGAACGCTTCGAATTAGGCTTCTTCAGTCCCGGCAATTCCACGAACCGATACTTGGGAATATGGTACAAGAAAATTCCAGTTCCAACAGTAGTTTGGGTTGCAAACAGAAACAACCCGATTACAGATTCAACAGGAGTTTTAAAGATCAACAGCGAAGGAAATCTCGTCCTTCTCAATCGAGATGCTACCCTTATCTGGTCGTCGAATATATCCAAGGCAGATAATCTGGTTGCACAGCTCTTGGACTCGGGAAACCTTGTCGTCAAAGAAGAAAGCGATGATGATCCCGAAAACTATCTATGGCAGAGTTTCGATTATCCAACCGATACTTTGTTACCGGGTATGAAGGTCGGATGGAACTTGAAAACAGGAATGAATCGGGTTTTAACATCGTGGAAGAACGCAGATGATCCTTCTATCGGAGACTATTCTTTCCGGATAGAATCTCGTGGATTCCCAGAAGCTTTCTTGTTGAACCGATTAGCCCGACAGTACCGAAGTGGGCCTTGGAATGGGCTCCGGTTTAGCGGTGTCCCAGAAATGAAGCCCAATTACATCTTCAATTTCAGTTTTACCTTCAACCAAGATGAGGTATATTACACATTTGCACTTCAGAATGAATCTTATTTTTCAAGGTTGATAGTGAACCAATCAGGTTTGCTTCAAAGATTTACATGGCTCGACACGAGTCGGTTCTGGAACCTCTTCTGGTACGCTCCGAAAGACCAATGTGACACTTACATGGAATGTGGTTCATATGGTATATGTGACACAAATGACTCACCAGTTTGCAAGTGTGTGAAAGGATTCGAACCTAAGCATCCAGAGGAGTGGTATTTAAGAGATGGGTCTGGTGGGTGCATAAGGAAAGAAGAATTTGAGTGCCAGAAGGGAGATGGGTTCTTAACATTGAAGGGCATGAAATTACCCGATACGTCGCGCACATTCGTAGACAAGAGCATGAGTCTTAACGAATGCGAAGCGATGTGCCGGAAGAATTGTTCTTGTACAGCTTACACAAATTCGGACATTATCGGTGAAGGAAGTGGTTGTGTAATTTGGGTCAGTGATCTGATAGATCTCCGAGAGTACACTGAAGGCGGCCAAGATCTCTACGTAAGGGTGGCAGCTTCGGAACTAGGAGAAGGTGGGAGTGCAGATTCTAAAAGTGATCCCAACAATAAGAAAAGGGTAACTGCGATAATTACGGTTACCGTGATCTCGGCAATTCTTGTATTGGGATTGACAATGTGTTTCATATGGAAGAAGAATATAATGAAAAAAATATGGAAGAGAAAAACAGAGGAAAGAGGTAATAGGGAGAAAAGCCAAGATTTACCATTATTTGACACGGTTATGCCGGGTATGAGAGATTACACAGATGAAAAAAAGGAAGATCTAGAGTTACCTTTATTCGATTTTGTTACTATAGTAACTGCTACAGACAGCTTCTCTGATGCAAATAAGCTTGGACAAGGTGGTTTCGGTTGCGTTTATAAGGCTACGTTGGCCGATGAACAAGAAGTAGCTGTGAAGAGACTATCGAAGAATTCAGGGCAAGGAGTAGAAGAATTCAAAAATGAAGTTATGTTAATTGCCAGGCTTCAACACAGGAATCTTGTTAGGCTTTTGGGTTGCTGCATTGAAGGAGAGGAAAAGATGTTAATCTATGAGTACATGCAAAACAAAAGCTTGGACTCCATACTTTTTGATAAAACAAAAAGCTCGCTATTGGATTGGCGAAAGCGCTTCAACATTATTGGGGGGATTGCCCGAGGACTTCTTTATCTTCACCAAGATTCTAGATTTAGAATCATTCATAGGGATCTCAAAGCGAGCAACGTTCTACTAGATGGAAAGATGAACCCAAAAATCTCAGACTTTGGAATGGCAAGAATCTTTGGAACCGACCAAACTGAAGCAAATACAAAGAGAGTAGTCGGAACATATGGTTATATGTCTCCTGAGTATGCGATGGATGGGCTCTTCTCTGTGAAATCTGATGTTTTCAGCTTCGGTGTTTTAGTACTGGAGATAGTCAGTGGTAAGAAGAACAGAGGATTTTATAATTCGAACAACCAACTTAACCTTCTCGGACATGCATGGAGACTGTGGAAAGAAGGGAAGGGCTTGGAACTGATGGATGCATTAATGGGAGATTCTTGCCCAACGTATGAAGTGTTGAGATGTATACACGTTGGCCTCTTGTGCGTTCAGGAACGTGCCGAAGATAGGCCGACAATGTCGTCTGTGGTTTTGATGTTGAGCAGCGAAACTGCAACATTGACTCAACCAAAACAGCCTGGATTCTGTCTAGTTACAAGTCCCATTGAAACAGAATCTTCTTCTAGTAAGCAAGAATCATGTACTGTAAATCAAGTGACGGTTACAATGCTACAAGCTCGGTAG 2541 0.4219 MRNITALHFWLVFCLTFFSKFSIAIDTITPTQSIRDGQTVVSAGERFELGFFSPGNSTNRYLGIWYKKIPVPTVVWVANRNNPITDSTGVLKINSEGNLVLLNRDATLIWSSNISKADNLVAQLLDSGNLVVKEESDDDPENYLWQSFDYPTDTLLPGMKVGWNLKTGMNRVLTSWKNADDPSIGDYSFRIESRGFPEAFLLNRLARQYRSGPWNGLRFSGVPEMKPNYIFNFSFTFNQDEVYYTFALQNESYFSRLIVNQSGLLQRFTWLDTSRFWNLFWYAPKDQCDTYMECGSYGICDTNDSPVCKCVKGFEPKHPEEWYLRDGSGGCIRKEEFECQKGDGFLTLKGMKLPDTSRTFVDKSMSLNECEAMCRKNCSCTAYTNSDIIGEGSGCVIWVSDLIDLREYTEGGQDLYVRVAASELGEGGSADSKSDPNNKKRVTAIITVTVISAILVLGLTMCFIWKKNIMKKIWKRKTEERGNREKSQDLPLFDTVMPGMRDYTDEKKEDLELPLFDFVTIVTATDSFSDANKLGQGGFGCVYKATLADEQEVAVKRLSKNSGQGVEEFKNEVMLIARLQHRNLVRLLGCCIEGEEKMLIYEYMQNKSLDSILFDKTKSSLLDWRKRFNIIGGIARGLLYLHQDSRFRIIHRDLKASNVLLDGKMNPKISDFGMARIFGTDQTEANTKRVVGTYGYMSPEYAMDGLFSVKSDVFSFGVLVLEIVSGKKNRGFYNSNNQLNLLGHAWRLWKEGKGLELMDALMGDSCPTYEVLRCIHVGLLCVQERAEDRPTMSSVVLMLSSETATLTQPKQPGFCLVTSPIETESSSSKQESCTVNQVTVTMLQAR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00187 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 649 661 IPR008271 GO:0004672|GO:0006468
Eupl02g00187 846 SMART ntp_6 340 419 IPR003609 -
Eupl02g00187 846 CDD PAN_AP_plant 338 420 - -
Eupl02g00187 846 ProSiteProfiles Protein kinase domain profile. 528 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00187 846 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Eupl02g00187 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 790 - -
Eupl02g00187 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 604 807 - -
Eupl02g00187 846 CDD B_lectin 31 151 IPR001480 -
Eupl02g00187 846 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Eupl02g00187 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Eupl02g00187 846 PIRSF SRK 1 846 IPR024171 GO:0004674
Eupl02g00187 846 ProSiteProfiles EGF-like domain profile. 284 320 IPR000742 -
Eupl02g00187 846 Gene3D Hepatocyte Growth Factor 335 417 - -
Eupl02g00187 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Eupl02g00187 846 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Eupl02g00187 846 Gene3D Transferase(Phosphotransferase) domain 1 604 812 - -
Eupl02g00187 846 Gene3D Phosphorylase Kinase; domain 1 502 603 - -
Eupl02g00187 846 Pfam D-mannose binding lectin 73 177 IPR001480 -
Eupl02g00187 846 ProSitePatterns Protein kinases ATP-binding region signature. 534 556 IPR017441 GO:0005524
Eupl02g00187 846 SMART blect_4 31 151 IPR001480 -
Eupl02g00187 846 Pfam PAN-like domain 339 405 IPR003609 -
Eupl02g00187 846 CDD STKc_IRAK 534 799 - -
Eupl02g00187 846 Gene3D - 20 148 IPR036426 -
Eupl02g00187 846 SMART serkin_6 528 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00187 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 476 603 - -
Eupl02g00187 846 Pfam Domain of unknown function (DUF3403) 801 846 IPR021820 GO:0004674
Eupl02g00187 846 Pfam Protein tyrosine and serine/threonine kinase 532 797 IPR001245 GO:0004672|GO:0006468
Eupl02g00187 846 SUPERFAMILY Protein kinase-like (PK-like) 511 831 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00187 Eupl-Chr2 2166500 2172534 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00187 516 846 Receptor kinase-like Gene Family AT4G11530 60.237 2.76e-140 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl02g00187 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00187 - - nnu:104605743 1182.55