Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00165 ATGGGAAGAACACCTTGTTGTGATAAAAATGGATTGAAGAAGGGGCCATGGACTCCAGAGGAAGATCAGAAGCTCATCGATTATATCCAGAAGCACGGCCACGGGAGTTGGCGAACACTTCCGAAGAATGCTGGTAAATATATATATATTTCTGATTTTTCTTCCTTGACATTCGACGATTCTCTTTTCTTTTTCATGTGTGGGTTTTTTTGGATAATTAAAGAAATGGGTAATTTTATAGGTCTTCAAAGGTGTGGAAAGAGTTGCCGTCTTCGATGGACAAATTATCTGAGGCCCGATATAAAGAGAGGGAGATTCTCATTCGAAGAGGAAGAGACCATAATCCAATTACACAGTATTGTGGGGAACAAGTGGTCCGCCATTGCTGCACGCTTGCCAGGACGAACCGACAACGAAATCAAGAACTACTGGAACACCCACATTAGAAAAAGACTCCTCCGAATGGGAATTGATCCCGTGACTCATAGTCCCCGTCTCGATCTTCTAGACATCTCTTCGATTCTCAGTTCATCTATTTACAACTCATCTCAATTGAATTTTTCAAGATTGCTTGGGATTCATGAACCACTCGTTAATCCAGAGCTCCTAAGGCTAGCTGCTACCACTCTCTTATCATCCGAAAGCCAAAACCCAGACTACTTTCTACAAAATCTTCAAGAAATCCAGCTCTGCAATCAACCCCATATCCAAAACCAATTTCTATCCTTCCAACCCTCAATTCAAGAAATCCCAGCTTGCACCACAGCAACTGCTCCTTGTGCTCCATTCTTAAATGAAACCCAATTCATACAAACCAATGTTGAGCAATTCCAGTCAAACGGGTGGCAGGACAATGTAGTGCCTTCAACTTTATCAGAAAATTTCGTTTCCATGCCAAATTACAGCTATTACGGCTCTGATCAATCATCAGTTGTCGACCGTTTATCCGAAAATTCGAATTTCCAATCTATCAACAACAGCAACACGAATTTCAGTTTTGCTTCGGTTCTATCGACACCTCAATCAAGCCCGACTCCTTTGAACTCATCCTCAACGCAGATCAACAGCAGCATTGAAGATGAGAGGGAGAGCTACTGCAGCAACATTTTGAAGTTCGAAATCCCCGATATGTTGGACGTCAACGAATTCCTGTAA 1155 0.4216 MGRTPCCDKNGLKKGPWTPEEDQKLIDYIQKHGHGSWRTLPKNAGKYIYISDFSSLTFDDSLFFFMCGFFWIIKEMGNFIGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSIVGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSPRLDLLDISSILSSSIYNSSQLNFSRLLGIHEPLVNPELLRLAATTLLSSESQNPDYFLQNLQEIQLCNQPHIQNQFLSFQPSIQEIPACTTATAPCAPFLNETQFIQTNVEQFQSNGWQDNVVPSTLSENFVSMPNYSYYGSDQSSVVDRLSENSNFQSINNSNTNFSFASVLSTPQSSPTPLNSSSTQINSSIEDERESYCSNILKFEIPDMLDVNEFL* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00165 384 SUPERFAMILY Homeodomain-like 11 43 IPR009057 -
Eupl02g00165 384 Gene3D - 13 102 - -
Eupl02g00165 384 Gene3D - 105 152 - -
Eupl02g00165 384 Pfam Myb-like DNA-binding domain 103 147 IPR001005 -
Eupl02g00165 384 Pfam Myb-like DNA-binding domain 14 44 IPR001005 -
Eupl02g00165 384 SUPERFAMILY Homeodomain-like 83 155 IPR009057 -
Eupl02g00165 384 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 319 - -
Eupl02g00165 384 SMART sant 102 150 IPR001005 -
Eupl02g00165 384 SMART sant 13 99 IPR001005 -
Eupl02g00165 384 FunFam Transcription factor MYB39 105 166 - -
Eupl02g00165 384 CDD SANT 16 97 IPR001005 -
Eupl02g00165 384 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Eupl02g00165 384 CDD SANT 105 148 IPR001005 -
Eupl02g00165 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 45 IPR017930 -
Eupl02g00165 384 ProSiteProfiles Myb-like domain profile. 9 97 IPR001005 -
Eupl02g00165 384 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 98 152 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00165 Eupl-Chr2 1928960 1930641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00165 1 384 MYB Transcription Factor Family AT4G21440 52.000 8.57e-114 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl02g00165 Myb_DNA-binding 6.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00165 K09422 - nnu:104612251 488.034