Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00157 ATGGGTGAAGAAAAGGTAGATAAAGAAGAAGAGCAAAGCTTGTCGGAATTACCCGCCGGAGGATCAAATATCCGGCTTGCGATCGAACTTATATGTTCTTTAATATCTCTTTCTCATTCTGTCAAAGTGTTTCATGTGAAGTGGCAGTTGATTCGAAACAAGCTTGAGGAGCTGAATTCTGGTCTAACTGCAGCTGAGAATTGTGATTCCGGTGTGAATTCGGCTTTTTTCGAATTAATCCCGGCTATATTTGTCACGGTCAATGACTGTTACGATCTTGCAGGTCGATGTGTCGACCTGTCATATAGTGGTAAGCTCCTTATGCAGAGCGACCTCGATGTAGTCTCTTCAAAGTTTGAGGTTCATCTCAAGAATCTTGCTCAAATCTATAATGCTGGAGCTCTGACCCAAGGTTCTGCGATAGTTGTGTCGAGGCCTAATGTTGCCGCTTGTCGAGATGATATGAAGTTCTATGTCGGGGATTTGTTGACAAGGCTGAAGATTGGAGGTTCTGAGATGAAAAGCCAGGCCTTGGTAGCTTTGAATGAAATTCTCCATGAAGATGAAAAATATGTGAGGATTGTGATCGAGACGGGTGAAATTATTACTCTCTTGGTGAGTTTTCTTGAATTTTCAGAGATGGATATTCAAGAAGAGTCGACGAAGGCGGTTTTGGTAATTGCAGGATTCAATTCTTATAAAGGTGTTCTTGTTGGGGCTGGAATCATTGCACCGTTGATATGGGTTTTGGAGTCAGGAAGTGAATTGGGGAAAGAAAGAGCAGCAAGAACTCTGCAGAAACTGACGGAGAATTCGGACAATGCCTGGTCAGTTTCCGCTCACGGCGGAGTTACAGCTCTGTTAAAGATCTCCACAAATGGCGATGGAAGAGGAGAGTCAATTAGTCCAGCTTGTGGGGTTCTAAAGAATCTAGCTAGAGTGGAAGAGATCAAGAGATTCATGGTCGAAGAAGGTGCAGTCTCAGCCTTCATCCAGCTTCTGAGATCAAAAGATGAAGCCTTGAAGATAAATGCGATTGAATTCCTCCAAATCATGGCTTGTGGAGACGAATCCATTCGTAAAATGGTTATCAGAGAAGGGGTAATCCACTCACTTGTCCGAGTCTTGGATCCGAAATCTTCCTTCTCATCGAAAGCCAGGGAGATTTCACTGAAAGCAATTGAGAGTTTCTGCTTCTCCTCTTCAAATTCTCTTCACATCCTGATGAGTTATGAATTTCTAGACCGACTCCTGTTCTTAATCCGCAAAGGTGAGGTCTCAGTTCAAGAATTGGCAGTAAAAGCGGCATTTCGTCTATCTGGGGCATCTGAGGAGACTAAGAAGGCAATGGGAGATGCAGGTTTTATGCCCGAGCTCGTGAAATTGCTTGAAGCAAGATCTTTTGAAGTTCGAGAAATGGCAGCTGAGGCACTCTCTAACATGGTTTTAGTCCCAAGGAACAGGAAGAGATTCTTACAGGAAGATTGCTATGTCGGTCGAATTCTACAATTGCTCGATCCTGAGGAGGGAAAATCAGACAAAGACACACATCTAATGGCTAATCCCACTGGTTTCCACTGA 1581 0.4364 MGEEKVDKEEEQSLSELPAGGSNIRLAIELICSLISLSHSVKVFHVKWQLIRNKLEELNSGLTAAENCDSGVNSAFFELIPAIFVTVNDCYDLAGRCVDLSYSGKLLMQSDLDVVSSKFEVHLKNLAQIYNAGALTQGSAIVVSRPNVAACRDDMKFYVGDLLTRLKIGGSEMKSQALVALNEILHEDEKYVRIVIETGEIITLLVSFLEFSEMDIQEESTKAVLVIAGFNSYKGVLVGAGIIAPLIWVLESGSELGKERAARTLQKLTENSDNAWSVSAHGGVTALLKISTNGDGRGESISPACGVLKNLARVEEIKRFMVEEGAVSAFIQLLRSKDEALKINAIEFLQIMACGDESIRKMVIREGVIHSLVRVLDPKSSFSSKAREISLKAIESFCFSSSNSLHILMSYEFLDRLLFLIRKGEVSVQELAVKAAFRLSGASEETKKAMGDAGFMPELVKLLEARSFEVREMAAEALSNMVLVPRNRKRFLQEDCYVGRILQLLDPEEGKSDKDTHLMANPTGFH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00157 526 Gene3D - 158 519 IPR011989 -
Eupl02g00157 526 SUPERFAMILY ARM repeat 161 511 IPR016024 -
Eupl02g00157 526 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 282 326 IPR000225 GO:0005515
Eupl02g00157 526 Pfam Armadillo/beta-catenin-like repeat 444 481 IPR000225 GO:0005515
Eupl02g00157 526 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 454 481 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 271 313 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 314 354 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 443 483 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 356 399 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 230 270 IPR000225 GO:0005515
Eupl02g00157 526 SMART arm_5 188 229 IPR000225 GO:0005515
Eupl02g00157 526 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 9 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00157 Eupl-Chr2 1809870 1812285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00157 96 432 U-box Gene Family AT2G23140 28.152 3.72e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00157 - - nnu:104612265 698.738