Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00147 ATGCAGAGCGACCTCGATGTAGTCTCTTCAAAGTTTGAGGTTCATCTCAAGAATCTTGCTCAAATCTATAATGCTGGAGCTCTGACCCAAGGTTCTGCGATAGTTGTGTCGAGGCCTAATGTTGCCGCTTGTCGAGATGATATGAAGTTCTATGTCGGGGATTTGTTGACAAGGCTGAAGATTGGAGGTTCTGAGATGAAAAGCCAGGCCTTGGTAGCTTTGAATGAAATTCTCCATGAAGATGAAAAATATGTGAGGATTGTGATCGAGACGGGTGAAATTATTACTCTCTTGGTGAGTTTTCTTGAATTTTCAGAGATGGATATTCAAGAAGAGTCGACGAAGGCGGTTTTGGTAATTGCAGGATTCAATTCTTATAAAGGTGTTCTTGTTGGGGCTGGAATCATTGCACCGTTGATATGGGTTTTGGAGTCAGGAAGTGAATTGGGGAAAGAAAGAGCAGCAAGAACTCTGCAGAAACTGACGGAGAATTCGGACAATGCCTGGTCAGTTTCCGCTCACGGCGGAGTTACAGCTCTGTTAAAGATCTCCACAAATGGCGATGGAAGAGGAGAGTCAATTAGTCCAGCTTGTGGGGTTCTAAAGAATCTAGCTAGAGTGGAAGAGATCAAGAGATTCATGGTCGAAGAAGGTGCAGTCTCAGCCTTCATCCAGCTTCTGAGATCAAAAGATGAAGCCTTGAAGATAAATGCGATTGAATTCCTCCAAATCATGGCTTGTGGAGACGAATCCATTCGTAAAATGGTTATCAGAGAAGGGGTAATCCACTCACTTGTCCGAGTCTTGGATCCGAAATCTTCCTTCTCATCGAAAGCCAGGGAGATTTCACTGAAAGCAATTGAGAGTTTCTGCTTCTCCTCTTCAAATTCTCTTCACATCCTGATGAGTTATGAATTTCTAGACCGACTCCTGTTCTTAATCCGCAAAGGTGAGGTCTCAGTTCAAGAATTGGCAGTAAAAGCGGCATTTCGTCTATCTGGGGCATCTGAGGAGACTAAGAAGGCAATGGGAGATGCAGGTTTTATGCCCGAGCTCGTGAAATTGCTTGAAGCAAGATCTTTTGAAGTTCGAGAAATGGCAGCTGAGGCACTCTCTAACATGGTTTTAGTCCCAAGGAACAGGAAGAGATTCTTACAGGAAGATTGCTATGTCGGTCGAATTCTACAATTGCTCGATCCTGAGGAGGGAAAATCAGACAAAGACACACATCTAATGGCTAATCCCACTGGTTTCCACTGA 1260 0.4397 MQSDLDVVSSKFEVHLKNLAQIYNAGALTQGSAIVVSRPNVAACRDDMKFYVGDLLTRLKIGGSEMKSQALVALNEILHEDEKYVRIVIETGEIITLLVSFLEFSEMDIQEESTKAVLVIAGFNSYKGVLVGAGIIAPLIWVLESGSELGKERAARTLQKLTENSDNAWSVSAHGGVTALLKISTNGDGRGESISPACGVLKNLARVEEIKRFMVEEGAVSAFIQLLRSKDEALKINAIEFLQIMACGDESIRKMVIREGVIHSLVRVLDPKSSFSSKAREISLKAIESFCFSSSNSLHILMSYEFLDRLLFLIRKGEVSVQELAVKAAFRLSGASEETKKAMGDAGFMPELVKLLEARSFEVREMAAEALSNMVLVPRNRKRFLQEDCYVGRILQLLDPEEGKSDKDTHLMANPTGFH* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00147 419 SMART arm_5 81 122 IPR000225 GO:0005515
Eupl02g00147 419 SMART arm_5 123 163 IPR000225 GO:0005515
Eupl02g00147 419 SMART arm_5 249 292 IPR000225 GO:0005515
Eupl02g00147 419 SMART arm_5 164 206 IPR000225 GO:0005515
Eupl02g00147 419 SMART arm_5 207 247 IPR000225 GO:0005515
Eupl02g00147 419 SMART arm_5 336 376 IPR000225 GO:0005515
Eupl02g00147 419 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 408 - -
Eupl02g00147 419 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 347 374 IPR000225 GO:0005515
Eupl02g00147 419 Gene3D - 51 412 IPR011989 -
Eupl02g00147 419 Pfam Armadillo/beta-catenin-like repeat 337 374 IPR000225 GO:0005515
Eupl02g00147 419 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 175 219 IPR000225 GO:0005515
Eupl02g00147 419 SUPERFAMILY ARM repeat 54 406 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00147 Eupl-Chr2 1671246 1673340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00147 4 325 U-box Gene Family AT2G23140 28.834 4.98e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00147 - - nnu:104612265 568.926