Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00143 ATGCGAGTCTTCTCCTTCTACGAGAGAGCCTCTCGAGCTTTTCAAGACCATCCTAAGCTCTCCAAGCTTATTGTTCTCTTCACCGTCAGTAGTGGGGGTCTTGTAGCATATTCTGAGTCGAAATCATACCATGGTGCAAACAGTGTTGATTTGTCTCAAGATGCCAAAAAAAAGAGAGTGGTGGTGCTTGGAACTGGGTGGGCTGGCACCAGTTTCTTAAAAAATCTGGATAATTCCACGTATGATGTTCAGGTGGTGTCACCTCGTAATTATTTTGCATTCACTCCCTTGTTACCAAGTGTCACTTGTGGCACAGTGGAAGCACGCAGCATTGTCGAGCCGATCCGCAACATTGTTAAGAAGAAAAATGGAGAAATTAGATTTTTGGAAGCTGAATGTGTCAAGATTGATGCAAAAGATAAGAAAGTTTGCTGTCGGTCTACCCAACACACGAATTTGGAAGGGAAAGAGGAGTTTTTTGTTGACTATGACATATTGGTGGTAGCCTTGGGAGCTCGTGCAAATACGTTTAACACACCTGGTGTCGTGGAGCATTGCCATTTCTTGAAGGAAATAGAGGATGCTCAGAATATCCGTAAGAGTGTGATTGACTGTTTTGAAAGGGCCAGCCTGCCCAACCTAACTGAGGAAGAGAGGAGGAAAAATCTTCATTTTGTAGTTGTTGGTGGTGGTCCAACTGGCGTGGAGTTTGCTGCAGAGCTTCATGACTATATTGATGAAGATTTGATTAAGCTATATCCAACAGCTAAAGGCCTAGTGAAAGTAACACTTCTTGAGGCAGGAGATCATATTTTGAACATGTTTGACAAAAGAATCACTGCTTTTGCTGAAGACAAGTTCCAAAGAGATGGTATTGATGTGAAAACAGGGTCTATGGTTGTAAAAGTAACTGATAAGGCCATTTCTACGAAGGAAAGATCGAATGGACAGATTTCTTCTATACCATATGGAATGGTTGTTTGGTCAACTGGTATTGGGACTCGCCCTGTCATAATGGATTTTATGCAGCAAATTGGTCAGACTAATAGGCGTGTTTTAGCAACTGACGAATGGCTACGAGTTGAGGGATGTGATGGCATATATGCACTTGGTGATTGCGCGACTATTAATCAACGCAAAGTCATGGAAGATATATCCGTGATATTTAGTAAGGCAGACAAAGACAAATCTGGTACTCTAAAAGTTAAAGAATTCCATGATGTCGTTGACGACATCTGTGAAAGGTACCCTCAAGTGGAGCTTTATTTGAAGCACAATAAGATGAAAAATATTGTAGATCTTTTGAAGGAGTCCAAAGGGAATGAGTTCAAAGAATCTGTTGAACTAGATATCGAAGGGTTAAAATCAGCACTTTCCCAAGTGGATTCAAAGATGAAAAATCTTCCTGCAACAGCTCAGGTTGCTGCTCAACAAGGCCAATACTTAGCAATGTGTTTTAACAAAATGGAGGAGTGTGAAAAGAACCCAGAAGGTCCTCTTAGGTTCAGGGGATCAGGACGACATCGATTTCATCCGTTTAGGTATAAGCATTTTGGGCAGTTTGCTCCATTGGGAGGAGAGCAAACAGCAGCACAATTGCCTGGCGATTGGGTTTCGATAGGTCATAGCACGCAGTGGCTCTGGTATTCTGTTTATGCAAGCAAGCTAGTCAGCTGGCGCACCAGGGTGTTGGTGATATCTGACTGGACAAGGCGATCCGTTTTTGGGAGGGACTCTAGTGGCATTTGA 1749 0.4265 MRVFSFYERASRAFQDHPKLSKLIVLFTVSSGGLVAYSESKSYHGANSVDLSQDAKKKRVVVLGTGWAGTSFLKNLDNSTYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIVKKKNGEIRFLEAECVKIDAKDKKVCCRSTQHTNLEGKEEFFVDYDILVVALGARANTFNTPGVVEHCHFLKEIEDAQNIRKSVIDCFERASLPNLTEEERRKNLHFVVVGGGPTGVEFAAELHDYIDEDLIKLYPTAKGLVKVTLLEAGDHILNMFDKRITAFAEDKFQRDGIDVKTGSMVVKVTDKAISTKERSNGQISSIPYGMVVWSTGIGTRPVIMDFMQQIGQTNRRVLATDEWLRVEGCDGIYALGDCATINQRKVMEDISVIFSKADKDKSGTLKVKEFHDVVDDICERYPQVELYLKHNKMKNIVDLLKESKGNEFKESVELDIEGLKSALSQVDSKMKNLPATAQVAAQQGQYLAMCFNKMEECEKNPEGPLRFRGSGRHRFHPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGHSTQWLWYSVYASKLVSWRTRVLVISDWTRRSVFGRDSSGI* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00143 582 SUPERFAMILY FAD/NAD(P)-binding domain 57 276 IPR036188 -
Eupl02g00143 582 PRINTS FAD-dependent pyridine nucleotide reductase signature 60 79 - -
Eupl02g00143 582 PRINTS FAD-dependent pyridine nucleotide reductase signature 163 181 - -
Eupl02g00143 582 PRINTS FAD-dependent pyridine nucleotide reductase signature 224 242 - -
Eupl02g00143 582 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 426 581 - -
Eupl02g00143 582 ProSiteProfiles EF-hand calcium-binding domain profile. 380 415 IPR002048 GO:0005509
Eupl02g00143 582 SUPERFAMILY FAD/NAD(P)-binding domain 219 377 IPR036188 -
Eupl02g00143 582 PANTHER NADH DEHYDROGENASE 52 581 IPR045024 GO:0003954|GO:0006116
Eupl02g00143 582 PRINTS Pyridine nucleotide disulphide reductase class-II signature 59 81 - -
Eupl02g00143 582 PRINTS Pyridine nucleotide disulphide reductase class-II signature 220 244 - -
Eupl02g00143 582 PRINTS Pyridine nucleotide disulphide reductase class-II signature 362 380 - -
Eupl02g00143 582 SUPERFAMILY EF-hand 338 433 IPR011992 -
Eupl02g00143 582 Gene3D - 423 581 - -
Eupl02g00143 582 Gene3D - 47 406 - -
Eupl02g00143 582 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 49 409 - -
Eupl02g00143 582 Pfam Pyridine nucleotide-disulphide oxidoreductase 58 383 IPR023753 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00143 Eupl-Chr2 1636946 1644948 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00143 1 582 Chloroplast and Mitochondria Gene Families AT4G21490 72.384 0.0 869
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00143 K03885 - vvi:100241384 1003.82