Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00136 ATGTTGTCTACGGTGTTGCCTTCTAATGCTACTCGTAGCTCACTGGAGGAAATGCTGGACTCTATTCGACGAAGGGACGAGCTGCCGAAGGACATACCGCCAGCGTTGCCTGTTCGTCCGACTTCGAAGGCTCGGTTGCCCTCATCAAGAAGGACGTTGCCTGTTAACTTCAAGTTTGGTGCTGCTGCTCCCGAGTACTTGACCAGTGATGCTGGAGAGAAGGAAGGGAGGAACAGGGATTGGTGTTCTACAAAGGAAGATAAGGAATCGGATTTCAAAAGTGACGGTTTTGGGAGCAAAAAGATGTTGAAGGTGGAGGTGGGCCCTCCAGCCGAATCGCCGTATGCTAGGAAGGCGGGAAAGGAGAATTATGAAGAAAAGTTGGAAGGAAATGACAATTCGGATCTTGTGGCTGCACCTTCGTCCTTGCTGCTTTCAGCTGAGGAGTCTGAGTGGGGTGACAACATTGGCTATGTTCTGAAAAAGAAACTTCAGGTTTGGTGTCGTCTCCCAAATGGCCAATGGGAGTCAGGAAAGATTCAATCAACTTCTGGGGAGAATGCTCTTGTTTTGCTTTCAGATGGCGTTGTTGTAACAGTGCCCACGGCAAATCTATTACCTGCTAACCCAGATATCCTTGAGGGTGCTGATGATCTTATACAGCTCAGTTACTTGAATGAGCCATCAGTTCTTCACAATCTCCAATACAGATATACTCATGATATGATTTATACTAAAGCTGGGCCTGTTTTGGTTGCCATCAATCCCTTTAAAGATGTCCAACTTTATGGAAATGATTTTCTCGCATCTTATAGGCAGAAAGTTAAGGATAGCCCTCACGTCTATGCTATAGCAGACACTGCCTTCCGTGAGATGATGAGAGATGAACTAAATCAATCCATCATCATAAGTGGGGAAAGTGGTGCTGGGAAAACCGAAACAGCAAAGATAGTGATGCAGTACTTGGCTGCACTTGGAGGTGGCAATGGGATAGAGTATGAAATCCTTCAGACAAATTGTATACTGGAAGCATTTGGGAATGCAAAAACATCCAGAAATGACAACTCTAGTCGATTTGGAAAGCTGATTGAAATTCATTTTAGCACAACTGGGAAAATTTGTGGTGCTAAGATTCAAACCTGTGAGCAACTGAGCATGGTGGTTCAGCTAGCTAAGGGAGAAAGAACATACCATATCTTCTATCAACTTTGTGCTGGTGCTCCATCCTTTCTCAAAGAGAGGTTGAACTTGAAAAAGGTCAGTGAGTACAACTATCTAAAGCAGAGTGATTGCTTGACTATTGATGATGTTGATGATGCTCGAAGATTTCATATGCTGATGGAAGCCTTAGATATTGTTCAACTCTGTAAAGAAGATCAAGAAAATGCATTTTCTATGCTTGCTGCAGTGTTATGGCTGGGAAACATTTGCTTTCAAGTAATTGACAATGAAAATCATGTGGAAGTTGTGAAAGATGAAGCTGTGAATAATGCTGCCAAGTTGATGGGTTGCGATGTTCGAGCTTTGATGTTAGCTTTATCAACTCGTCGAATCCGAGCTGGCAGTGAAAATATTGTCCAAAAGCTAACCATGTCGCAGGCCGTTGACACGAGGGATGCATTGGCAAAATCCATCTATGCAAGCTTGTTTGATTGGCTTGTAGAGCAAATCAACAAGTCACTTGAAGTAGGCAAATGGCGTACAGGGAGATCCATAAGCATCTTAGATATCTACGGGTTTGAATCGTTTCAGAAGAACAGCTTCGAACAGTTTTGCATAAACTATGCAAATGAGAGGCTGCAACAACATTTCAATCGGCATCTATTTAAACTCAAACAGGAGGAGTATACACAAGATGGGATTGATTGGACAAAAGTTGATTTTGAAGACAACCAAGAGTGTTTAAATCTCTTTGAGAAGAAACCTTTAGGGCTACTGTCTTTATTGGATGAGGAATCGACTTTCCCCAAAGCTACTGATTTGACCTTTGCCAATAAGCTTAAGCAGCATTTGAAGACTAATTCCTGCTTTAAAGGGGAAAGAAATGGGGCTTTCAGTGTTTGCCATTATGCTGGAGAGGTTTTGTATCATACAAGTGGCTTCTTGGAGAAGAACAGAGATCCACTGTACTCTGATTCCATCCAACTTCTCTCATCATGCAGTTGCCAACTACCTCAGTTATTTGCCTCAAACATGCTTGATCCATCACAGAATCCAGTGAGTCCTTTGTGGCGGCTAGGTGCTGCTGACTCCCAGAAACAAAGTGTTGGGACAAAGTTTAAGGGTCAACTGTTCAAACTGATGCAGCAGTTGGAAAACACCACACCCCACTTCATTCGTTGCATAAAGCCAAACAGCAAGCAACTTCCTGGTATTTATGAAAAGGATCTTGTATTGCAGCAGCTCAGATGCTGTGGAGTCTTGGAGGTTGTTAGGATCTCAAGATCTGAGTATCGAACTCGGATGACACATCAACAGTTTGCACAAAGGTATCAGTGTCTTCTTTTGGAGAACGTTGTATCTCAGGATCCGTTAAGTATATCAGTTGCCATTCTTCAGCAGTTTAATGTCCATCCAGATATGTATCAAGTTGGTTATACAAAGTTATTTTTCCGAACAGGGCAGATTGCTGCATTGGAAAATGCAAGAAAACAAATGCTGCAAAGCATACTCATGGTTCAAAAATGCTTCCGTGGTCAACAAACTCGCTGTCGTTTCCATGAGCTGAAGAGAGGAATAACAGTACTGCAATCATTTGTCCGCGGTGAAAATGCAAGAAAGGAGTATCAGATTTTGATAAAGAGGTGGAGAGCAGTTGTTCTCATACAGAAGCATATGAAGCAGTGTATTGCTAGGAGAACACTAAATGATCGGCAGAGGGCAGTCATACATTTGCAGTCTGTAATCCGTGGTTGGCTGGTCCGAAGGTATTTTCACAACATGCAAAATCTGGAAAGATCAAATCTTGACAGCACAAAAGCTAAAAAACAGCTAGACCAGAATATCCCAGAACTGAAGAATTTGAACCTGGAGCATGTTCAGGTTCAATCTTCAGTTTTGGCAGAGGTTCAAAGTCAGGTTCTGAAGGCTGAAGCAGCACTGGGCCAAAAGGAAGAGGAAAATGCCATATTGCAGCAGCAGCTAAAGCAATTCGAGACGAAGTGGTTGGACTACGAGGCAAAGATGAAATCCATGGAAGAGATGTGGCAAAAACAGATGACATCTCTGCAGGTGAGTTTAGCAACTGCCAAGAAGAGTTTTGACACCGCAGGCCAACTTGGCAGACCTGATGCTTCCCCAGGGCCTCACTATTACGATTCTGAGGACACACACTCTGTAGAGACCCGCACCCCAGAAGGCAATACAACAATGAAAGTACCTAATCCCACTTATGAAACTGCACCAAGGCAAGAATCTTACAGCGGTCAAAATGCAGTCAGCTACCTGGTGAAGGAGTTTGAGCAGCGGAAACAGGTCTTTGACGACGATGCTAGGTTCCTCGTTGAGGTCAAATCAGGGCAGTCGACTTCCACAATGAATCCTGACACTGAGATCCGGAAGCTAAAGTTCAGGTTTGAGGCGTGGAAGAAAGAGTATAAAGTTAGGTTACAGGAGACAAAGGCAATGCTTCAGAAGCTTGGAAATGTAGAAGTAGAGAAGACTCGTAAGAAATGGTGGGGGAAGAGTTTCACAAGAGGGACGTAG 3705 0.4351 MLSTVLPSNATRSSLEEMLDSIRRRDELPKDIPPALPVRPTSKARLPSSRRTLPVNFKFGAAAPEYLTSDAGEKEGRNRDWCSTKEDKESDFKSDGFGSKKMLKVEVGPPAESPYARKAGKENYEEKLEGNDNSDLVAAPSSLLLSAEESEWGDNIGYVLKKKLQVWCRLPNGQWESGKIQSTSGENALVLLSDGVVVTVPTANLLPANPDILEGADDLIQLSYLNEPSVLHNLQYRYTHDMIYTKAGPVLVAINPFKDVQLYGNDFLASYRQKVKDSPHVYAIADTAFREMMRDELNQSIIISGESGAGKTETAKIVMQYLAALGGGNGIEYEILQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSTTGKICGAKIQTCEQLSMVVQLAKGERTYHIFYQLCAGAPSFLKERLNLKKVSEYNYLKQSDCLTIDDVDDARRFHMLMEALDIVQLCKEDQENAFSMLAAVLWLGNICFQVIDNENHVEVVKDEAVNNAAKLMGCDVRALMLALSTRRIRAGSENIVQKLTMSQAVDTRDALAKSIYASLFDWLVEQINKSLEVGKWRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLKQEEYTQDGIDWTKVDFEDNQECLNLFEKKPLGLLSLLDEESTFPKATDLTFANKLKQHLKTNSCFKGERNGAFSVCHYAGEVLYHTSGFLEKNRDPLYSDSIQLLSSCSCQLPQLFASNMLDPSQNPVSPLWRLGAADSQKQSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNSKQLPGIYEKDLVLQQLRCCGVLEVVRISRSEYRTRMTHQQFAQRYQCLLLENVVSQDPLSISVAILQQFNVHPDMYQVGYTKLFFRTGQIAALENARKQMLQSILMVQKCFRGQQTRCRFHELKRGITVLQSFVRGENARKEYQILIKRWRAVVLIQKHMKQCIARRTLNDRQRAVIHLQSVIRGWLVRRYFHNMQNLERSNLDSTKAKKQLDQNIPELKNLNLEHVQVQSSVLAEVQSQVLKAEAALGQKEEENAILQQQLKQFETKWLDYEAKMKSMEEMWQKQMTSLQVSLATAKKSFDTAGQLGRPDASPGPHYYDSEDTHSVETRTPEGNTTMKVPNPTYETAPRQESYSGQNAVSYLVKEFEQRKQVFDDDARFLVEVKSGQSTSTMNPDTEIRKLKFRFEAWKKEYKVRLQETKAMLQKLGNVEVEKTRKKWWGKSFTRGT* 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00136 1234 ProSiteProfiles IQ motif profile. 886 914 IPR000048 GO:0005515
Eupl02g00136 1234 Gene3D - 818 882 - -
Eupl02g00136 1234 CDD MYSc_Myo8 228 872 IPR036022 -
Eupl02g00136 1234 Gene3D Myosin VI head, motor domain, U50 subdomain 452 560 - -
Eupl02g00136 1234 Gene3D Kinesin motor domain 213 815 IPR036961 -
Eupl02g00136 1234 Gene3D - 885 935 - -
Eupl02g00136 1234 Gene3D - 936 986 - -
Eupl02g00136 1234 MobiDBLite consensus disorder prediction 68 95 - -
Eupl02g00136 1234 FunFam Myosin heavy chain 395 451 - -
Eupl02g00136 1234 Coils Coil 1020 1054 - -
Eupl02g00136 1234 MobiDBLite consensus disorder prediction 1090 1138 - -
Eupl02g00136 1234 Gene3D - 583 774 - -
Eupl02g00136 1234 MobiDBLite consensus disorder prediction 1116 1138 - -
Eupl02g00136 1234 MobiDBLite consensus disorder prediction 23 48 - -
Eupl02g00136 1234 ProSiteProfiles Myosin motor domain profile. 214 884 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 934 IPR027417 -
Eupl02g00136 1234 SMART iq_5 885 907 IPR000048 GO:0005515
Eupl02g00136 1234 SMART iq_5 934 956 IPR000048 GO:0005515
Eupl02g00136 1234 SMART iq_5 957 979 IPR000048 GO:0005515
Eupl02g00136 1234 SMART iq_5 908 930 IPR000048 GO:0005515
Eupl02g00136 1234 Pfam IQ calmodulin-binding motif 960 979 IPR000048 GO:0005515
Eupl02g00136 1234 Pfam IQ calmodulin-binding motif 911 930 IPR000048 GO:0005515
Eupl02g00136 1234 Pfam Myosin head (motor domain) 217 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 FunFam Unconventional myosin-XIX 583 774 - -
Eupl02g00136 1234 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 161 210 IPR004009 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 SMART MYSc_2a 208 885 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 Gene3D - 395 451 - -
Eupl02g00136 1234 PRINTS Myosin heavy chain signature 298 323 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 PRINTS Myosin heavy chain signature 624 652 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 PRINTS Myosin heavy chain signature 571 599 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 PRINTS Myosin heavy chain signature 340 367 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 PRINTS Myosin heavy chain signature 244 263 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl02g00136 1234 ProSiteProfiles IQ motif profile. 958 987 IPR000048 GO:0005515
Eupl02g00136 1234 PANTHER MYOSIN 207 1222 - -
Eupl02g00136 1234 MobiDBLite consensus disorder prediction 70 95 - -
Eupl02g00136 1234 Coils Coil 981 1001 - -
Eupl02g00136 1234 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00136 Eupl-Chr2 1520945 1540548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00136 1 1228 Myosins gene family AT5G54280 60.000 0.0 1476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00136 K10357 - msin:131236414 1798.48