Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00135 ATGTCGTCTTCTTCGACGAAGATCTGCTTCAATCCAGATTGTATAGACGAGAAATCGGAGCGGTCGAGGAAAGGATGGCGGATTCGAACTGGAGATTTTGCAGAGCTCTGTGATCGATGCTTTTCTGCATATGAGGAAGGGAGATTCTGTGAAACATTTCACTCAGATGCTGCTGGTTGGAGGAGTTGTGAGTCTTGTGGAAAGCGGGTACACTGTGGATGTATTGTTTCAGTCCATGCATTTGTACTATTGGATGCTGGGGGAGTCGAGTGTATGGCATGTGCTAGCAAAAACCTTGTTATGCCTTCGAACCCGATATGGCCATCCTCTTTGTTTCTGCCTCTACCAGAGAGACTTAAAGACCTCTCTGTTAAAAACTGGAATCCAATTGTTGGACCAAGTGCAGTTGCTGGACAGTGGCGGCAACTACCCAATTCACGGAATACTGTTAACGTTCAGTCTGAATTGCATCCACGGATGCCCTATGAAGTTGATAGATCACATGGCATTGAGAAACTGGTTTCTAGTGAGCACCTGTCTGCCTCTGTCCTGGAAAAGAAACTTGAAGATACATCTGAAAGAGTAATGTCTAGCAGCATCAAGCTTGCTGCACTGGAGAGACTTGCAAATGGGAATGCCGGTGTTGACACGGTGCCTGCATTACATATGTTTCATGTGGAGGAAGGGAATCTAGATGGCTTGCAAGGTTCATGCCACCTTACAGGAGAAAATGATCCAGTGGATACAAGAAAAGGAGTGATTGCTGAACGTGGCTTGAACACTTCTGTTGCAGGAATGACCTATGATGCACATCCGAATTCATGTGTAAATATTTCACTACAGTCCTCCACTTCAAAGGATGATCCATCAACTCCACATTTTGGTTTGGCTGTACCTTATACATCACCCAGTGAAACAAATGGTTCAACCAGGGTTTCTGGAACTCAAGCACAACGACAAACCCCTCCACTTCCATTAGCAAAGCAATTCTATGCTAGTCCACAAAATGGAGTGGACTCTTCTGGTGAAACTCAAATACGTAATGGAAGATCAAGAGGGGATGTTCGGGGACGAAATCAGTTACTTCCTCGATACTGGCCAAGGATAACTGATCAAGAGCTACAACAAATCACGGGAGACTCAAATTCTGTCATCACTCCCTTGTTTGAGAAGATGTTAAGTGCTAGTGATGCCGGAAAGATAGGGCGTTTAGTGCTGCCAAAAAAATGCGCAGAGGCTTATTTCCCTACAATTTCTCAGCCAGAAGGATTACCTCTAAAAGTTCAGGATGCAAGAGGCAAGGAGTGGGTATTTCAATTCCGCTTCTGGCCCAATAATAACAGCAGGATGTATGTTTTGGAGGGGGTCACACCTTGCATTCAGTCCATGCAATTGCAAGCAGGTGACACAGTAACATTCAGTCGGATAGATCCAGAAGGAAAGTTGGTCATGGGATTCAGAAAGGCTTCAAGCGTTCCACTATCTGACCAGGGCCATCAACCACTTAAGACTGGGAATGGTGTCTCCACAAATGCAGAGGTTAATAATAGAAAATCTAAATCTAGTGAAGCTGTTTCAACTCCTCTTCGTCCTTTAAAGGGTATTGCAGAATCAAATAGTTTCTCATCAATCAACCAGAATTTGGCAGATCCTGCAAATGCCTGGTCTAAAGTTGATAAATCAGGCTATATAGCAAAAGATGTGCCTGGGGCTAAGTCTTCCCTCGTCCCTAGTAAGAGGAAAAGCAGCACTCTTGGTTCAAAGAGTAAACGCCTACGGATTGAAAATGAAGATTTAATAGAGCTCAAGCTTACATGGGAAGAAGCTCAAGGTCTGCTCCGCCCACCTCCTAACCATGTTCCCAGTATTGTGGTCATTGAAGGCCATGAATTTGAGGAATACGAGGAAGCACCAATACTCGGGAAACCTACAATTTTCACAACCAATCATTTGAGTGAAAAGATTCAATGGGCTCAGTGTGATGCCTGTTCAAAGTGGCGTAAACTTCCTGTCGACGCGCTTCTTCCCTCGAGATGGACCTGTTCTGATAATTCATGGGATTCAAAAAGGTCTTCGTGTTCATCAGATCAGGAAATAACGGTGGAACAGCTTCAAGATCTGCTCTTCTCTGGTAAAACTGCTATTTCCAAGAAAACCAAGTCCGCCAAAAAGGACTCGGATGCAATCGAAGCGTCAGAGGGGCTTGACACTCTTGCCAACCTTGCCATCCTGGGTGAGGCCCTCCCTCCTTCAGCCCAGGCCACCACGAAGCACCCTCGCCATCGGCCTGGGTGTTCATGCATTGTCTGCATCCAGCCCCCGAGTGGGAAGGGCCCTAAGCACAAGGACACGTGCACGTGCAATGTCTGCCTGACTGTAAAGCGCCGGTTCCGCACCCTGATGCAGCGGCGTGAGAAGAAGCAATCGGAGAAGGAAGCTGAGACCACCCGAAAGAAGCAGCAGCAGCAGCAGCAGCTCCAGATGCCTGAGAAGCTGGAGCAGGAGGATGATCCACCAATGGATAGCAACACGAGCAACAGTGGTCTAAACCAGAAAATGGTTGTCAATGGGAGTGCTGATGATGATCACAACAGAAAGAAACCATCCTCTTCACCTTTTAAAGGCCAGATTGACCTGAATATCCAGCCAGAGCGGGAAGATGAGCCATCACCAGTGTCAGATTCTGGCAACATGATGAGGCTGCTACGAGATGCTACCGACATGTATCTCAGACAGCAAAGGCTGATGAGTTCGGCCGGCAACAGAGATCCACTTGTTGATCAGATAGAGTCCAGTAGAGGGGGAGGGGATAAGCTTGACAGTGGTGTTCCCCATGAAGGCGATCATCTGAATGCTGACACAGACCATCCTGTCACTCTATCTATGTCCATGTCAGCTCCCACATCAACAACTGGCTAG 2919 0.4687 MSSSSTKICFNPDCIDEKSERSRKGWRIRTGDFAELCDRCFSAYEEGRFCETFHSDAAGWRSCESCGKRVHCGCIVSVHAFVLLDAGGVECMACASKNLVMPSNPIWPSSLFLPLPERLKDLSVKNWNPIVGPSAVAGQWRQLPNSRNTVNVQSELHPRMPYEVDRSHGIEKLVSSEHLSASVLEKKLEDTSERVMSSSIKLAALERLANGNAGVDTVPALHMFHVEEGNLDGLQGSCHLTGENDPVDTRKGVIAERGLNTSVAGMTYDAHPNSCVNISLQSSTSKDDPSTPHFGLAVPYTSPSETNGSTRVSGTQAQRQTPPLPLAKQFYASPQNGVDSSGETQIRNGRSRGDVRGRNQLLPRYWPRITDQELQQITGDSNSVITPLFEKMLSASDAGKIGRLVLPKKCAEAYFPTISQPEGLPLKVQDARGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPEGKLVMGFRKASSVPLSDQGHQPLKTGNGVSTNAEVNNRKSKSSEAVSTPLRPLKGIAESNSFSSINQNLADPANAWSKVDKSGYIAKDVPGAKSSLVPSKRKSSTLGSKSKRLRIENEDLIELKLTWEEAQGLLRPPPNHVPSIVVIEGHEFEEYEEAPILGKPTIFTTNHLSEKIQWAQCDACSKWRKLPVDALLPSRWTCSDNSWDSKRSSCSSDQEITVEQLQDLLFSGKTAISKKTKSAKKDSDAIEASEGLDTLANLAILGEALPPSAQATTKHPRHRPGCSCIVCIQPPSGKGPKHKDTCTCNVCLTVKRRFRTLMQRREKKQSEKEAETTRKKQQQQQQLQMPEKLEQEDDPPMDSNTSNSGLNQKMVVNGSADDDHNRKKPSSSPFKGQIDLNIQPEREDEPSPVSDSGNMMRLLRDATDMYLRQQRLMSSAGNRDPLVDQIESSRGGGDKLDSGVPHEGDHLNADTDHPVTLSMSMSAPTSTTG* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00135 972 SUPERFAMILY DNA-binding pseudobarrel domain 386 488 IPR015300 -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 803 818 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 839 854 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 333 348 - -
Eupl02g00135 972 Pfam CW-type Zinc Finger 656 698 IPR011124 GO:0008270
Eupl02g00135 972 Gene3D - 367 492 IPR015300 -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 802 897 - -
Eupl02g00135 972 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 6 920 - -
Eupl02g00135 972 CDD B3_DNA 387 488 IPR003340 GO:0003677
Eupl02g00135 972 MobiDBLite consensus disorder prediction 492 527 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 493 526 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 956 972 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 300 323 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 281 357 - -
Eupl02g00135 972 ProSiteProfiles B3 DNA-binding domain profile. 389 490 IPR003340 GO:0003677
Eupl02g00135 972 Gene3D - 646 700 - -
Eupl02g00135 972 Coils Coil 803 826 - -
Eupl02g00135 972 FunFam B3 domain-containing transcription repressor VAL1 367 493 - -
Eupl02g00135 972 ProSiteProfiles Zinc finger CW-type profile. 651 701 IPR011124 GO:0008270
Eupl02g00135 972 SMART B3_2 389 490 IPR003340 GO:0003677
Eupl02g00135 972 MobiDBLite consensus disorder prediction 939 953 - -
Eupl02g00135 972 MobiDBLite consensus disorder prediction 919 972 - -
Eupl02g00135 972 Pfam B3 DNA binding domain 389 488 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00135 Eupl-Chr2 1484323 1505940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00135 325 807 B3 DNA Binding Superfamily AT4G32010 53.226 8.34e-164 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl02g00135 B3 2.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00135 K09287 - nnu:104605675 1340.1