Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00130 ATGAACGAGAAGGCGAACGTCTCTAAAGAGCTCAATGCCAGGCACAAAAAGATACTGGAGGGGCTTCTTAAATTGCCAGAGAATAGGGAGTGCGCTGACTGCAAAAGCAAAGGTCCAAGATGGGCTAGCGTGAACCTGGGAATCTTCATATGCATGCAGTGTTCCGGAATCCATAGAAGTCTTGGGGTACACATATCAAAGGTGAGGTCTGCAACACTGGATACATGGCTTCCGGAGCAGGTTGCATTTATTCAATCAATGGGAAACGAGAAGTCAAACAGCTACTGGGAAGCAGATCTACCCCCAAATTATGACAGAGTTGGGATAGAGAACTTCATTCGTGCAAAGTATGAAGATAAAAGATGGATTCCGAGGGATGGAAAACCAAAATCACCTCCAAAAGTGCAAGAAGAGAAAGCTTCTGTATATAGGCAGAGACCTGGGGATAGAGGTGGGCATGGATACTCCAACAATCTAGAACATTTTTCCGAGGAGCAGAGGAATACCCCACCACCTGCTACAAAAAACAGTATTCCTGCTACAAAAATCAGTATTCGTGCAGCTCCTAAAGTATCTAGTCAGGTCTCTTCTGATCCAAAACCAGCATCAGTTGTGTTGAAACCAGAATCGATCACACCGCAGGCTGTATCAACAACACAGGCAGCTAATGCTACACCAGTTGCCTCACCTCCTAAAGTTGATTTTGCTACTGATCTTTTCAACATGCTCTCTGTGGACGGTCCTAGCGAAAATGGCACAGAGACATCTTCCCTTGATGATAATGCATGGGCAGGATTCCAGTCTGCGGATTCAGCATCTTCAACAGAGAAAGTTGATCCCACAAAGCCAGTTGAAAGTAAGCCCCAATCCACATCTGGAATCGAGGATCTATTTATAGATTCTCCATTGGTCACACCACCTCCAGTTTCAGTGAAATCCCAGAAAGATGTAAAAAGCAATATTATGAGCCTCTTCGAAAAGTCCAATATGGTTTCACCATTTTCTATACATCAACAGCAACTTGCTATGCTAGCGCAGCAGCAGTCTCTTATCATGGCTGCTGCAGCTAAGTCCGGTGGTGGGGTCCCAACAATTCCTGTCACAATTCCTACAATTCCTGTCAATACCCAGCAACCTGGCTCCAACGGTGCCCACATAATTGGTGGCAATTTGCCCACTCAAAACTGGTCAAACCTTGGCTATCAAATTCCTGGAGTGAAGATGCCAGTGGCTGGACAGAATGAGCTACAGAATTTTATGCAGATGGGAAACATCAGACCTACACAGACATCGGGGAATTCTGTTCCTTTCCCAACATCCAGCATGTATCCTGTGGGGCCAGTTGCTCCAATCAATGGGGTAACCATCAGCGGAGTGAGTAGGCCGCCTTCGGCATCCCCTGTTTCTTCTGTCACTCCAACCCAATCTGGAAAAGATTACGATTTCTCATCATTAACACAAGGGATGTTCTCAAAACCCTAG 1482 0.4575 MNEKANVSKELNARHKKILEGLLKLPENRECADCKSKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKSNSYWEADLPPNYDRVGIENFIRAKYEDKRWIPRDGKPKSPPKVQEEKASVYRQRPGDRGGHGYSNNLEHFSEEQRNTPPPATKNSIPATKISIRAAPKVSSQVSSDPKPASVVLKPESITPQAVSTTQAANATPVASPPKVDFATDLFNMLSVDGPSENGTETSSLDDNAWAGFQSADSASSTEKVDPTKPVESKPQSTSGIEDLFIDSPLVTPPPVSVKSQKDVKSNIMSLFEKSNMVSPFSIHQQQLAMLAQQQSLIMAAAAKSGGGVPTIPVTIPTIPVNTQQPGSNGAHIIGGNLPTQNWSNLGYQIPGVKMPVAGQNELQNFMQMGNIRPTQTSGNSVPFPTSSMYPVGPVAPINGVTISGVSRPPSASPVSSVTPTQSGKDYDFSSLTQGMFSKP* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00130 493 CDD ArfGap 19 117 - -
Eupl02g00130 493 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Eupl02g00130 493 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Eupl02g00130 493 MobiDBLite consensus disorder prediction 123 158 - -
Eupl02g00130 493 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Eupl02g00130 493 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Eupl02g00130 493 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Eupl02g00130 493 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Eupl02g00130 493 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Eupl02g00130 493 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Eupl02g00130 493 MobiDBLite consensus disorder prediction 268 294 - -
Eupl02g00130 493 MobiDBLite consensus disorder prediction 123 146 - -
Eupl02g00130 493 MobiDBLite consensus disorder prediction 460 493 - -
Eupl02g00130 493 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 492 IPR044520 GO:0005096
Eupl02g00130 493 Gene3D Arf GTPase activating protein 1 129 IPR038508 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00130 Eupl-Chr2 1440430 1451555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00130 16 123 C2H2 Transcription Factor Family AT4G05330 47.414 9.34e-29 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00130 K12486 - nnu:104605670 689.108