Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00120 ATGGCTTACTTGAATTGGGAGATCTTCATGTGCTTGATGGTGATTTTTACTGCACCATTTTCCCAGGGATACACTGACCCACGAGACGTTTTTGCGATGAATAATTTATATGCTGCGTTGGGCTACCCTCTCCTTCCTGGATGGATTCCTAATGGAGGAGACCCGTGTTTGGAGGCTTGGCAAGGTGTTCAATGTGTGAATTCAAACATAACCGGAATAATCCTTACTGCTGCGAATTTGGGAGGAGAATTGGGCAATAACTTAGAATACTTTACTTCAATAATAACAATAGATTTGAGCAACAACCACATTGGGGGGAGTATTCCATCCAATTTGCCCCTTACCATTCAGAACTTTTTTCTTTCAGCTAACCAGTTCATGGGAAGCATCTCGAGTTCTTTATTGTCACTTACACAATTGACAGTTATGTCGCTCAACAACAATCTTTTGACTGGAGCAATACCAGATGCCTTCCGGGACCTTACGGGTTTGATAAATTTGGATCTGTCCGGTAACAATCTGAGTGGGCAACTGCCTCCTTCTTTGGAAAATTTGTCATCTCTTACCACCTTACACTTGCAGGACAATCAGATATCTGGGACTCTGGATGTTTTACAAAATCTTCCCCTGAGAGATTTGAATATAGAGCATAACCTATTCTCTGGACCTATACCTGAGAAGTTGTTGATTATCCCGAATTTCAAAAAGGATGGAAACCCATTCAACACTACTATTGCTCCATCATCCTCACCCCCATCCCCATCCCCACCGCCACCTATTTCTGGGACTCCAGCTTCTGAAGAAACACCTGGGAAACAGGCAAATGGACCGTCTGCTTCGGAAAACTCAGATCCTGTACGAACAAACAAATTTTGGAAAACTAAAAGGGTTGTTTGGATTGCAATTGCAGGGGTGTTAATATTTATTATAGTTGCAATAGGATTTGTGCTTTTTATGTTGAGATGTTTCAAAGAAAAACAAGAGCAAGAAAGCACTTCCAAGAGGCATCAAATGGGTCCATATAAAGGCCCCCAAAAGAAGTCTAAAGACAGTGTGTCTTTGGTCCAACCAAACAATCAAATAGAAAAAGTTCCAAAAGAGGCAGTTGTGAGGTCAAAGGATGAAAATGGGATGGATATTGGAAGAATGGGTGCAATTCCGAAGCCAAAGGACAAACAGGAGATGGATATGAAAAGAATGGGTGCGATTCCGAAGCAAAAGGAGGAATATGAAATAGATATGGCGGGAATGGATATGATTTTAATGTCTCCTCATCCTCCCCCTCCCCCTCCTCCTGTTGAGAAAGTCGTCCTAAATCCAATTGTGCCCACAGAAGTAACTGCAGGGAAGCCTCCTGCCAAAATTCTGAATCCCCCTACTTCTGTGAGGTCTTTCACTGTAGCATCTCTTCAGCAATATACAAACAGCTTTTCTCAAGAAAATCTCATTGGAGGCGGCATGCTGGGCAGCGTCTATCGGGCAGAACTCCCTGATGGAAAGCTACGGGCAGTCAAGAAACTGGACAACGTGACTTCCACGCGGCAGAAAGATGAAGAGTTTCTTGAGCTGGTGTCGAGTATCTCTAAGCTTCGACATGCTAATGTCGTCGAGCTTGTGGGTTACTGTGCAGATCATGGGCAACGGCTACTCATCTATGAGTACTGTAGTAATGGGACACTCCACGATGCGCTCCGCTCTGACAATGAACTCAATAAGAAGCTCTCATGGAATGCTCGCGTCAGAATAGCCCTTGGAGCTGCAAGAGCTCTAGAGTATCTGCATGAGGTCTGTCAACCACTTGTTGTACACCGGAATTTCAAGTCTGCCAATCTTCTCCTTGACGATGAGCTTGCAGTATGTGTCTCCGATTGCGGTTTGGCTCCTATAATATCTTCTGGCTCTGTAAGTCAGGTAAATCAATATTCTGCAATCTTCAAAGCTTAA 1944 0.4372 MAYLNWEIFMCLMVIFTAPFSQGYTDPRDVFAMNNLYAALGYPLLPGWIPNGGDPCLEAWQGVQCVNSNITGIILTAANLGGELGNNLEYFTSIITIDLSNNHIGGSIPSNLPLTIQNFFLSANQFMGSISSSLLSLTQLTVMSLNNNLLTGAIPDAFRDLTGLINLDLSGNNLSGQLPPSLENLSSLTTLHLQDNQISGTLDVLQNLPLRDLNIEHNLFSGPIPEKLLIIPNFKKDGNPFNTTIAPSSSPPSPSPPPPISGTPASEETPGKQANGPSASENSDPVRTNKFWKTKRVVWIAIAGVLIFIIVAIGFVLFMLRCFKEKQEQESTSKRHQMGPYKGPQKKSKDSVSLVQPNNQIEKVPKEAVVRSKDENGMDIGRMGAIPKPKDKQEMDMKRMGAIPKQKEEYEIDMAGMDMILMSPHPPPPPPPVEKVVLNPIVPTEVTAGKPPAKILNPPTSVRSFTVASLQQYTNSFSQENLIGGGMLGSVYRAELPDGKLRAVKKLDNVTSTRQKDEEFLELVSSISKLRHANVVELVGYCADHGQRLLIYEYCSNGTLHDALRSDNELNKKLSWNARVRIALGAARALEYLHEVCQPLVVHRNFKSANLLLDDELAVCVSDCGLAPIISSGSVSQVNQYSAIFKA* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00120 647 MobiDBLite consensus disorder prediction 247 264 - -
Eupl02g00120 647 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 26 253 - -
Eupl02g00120 647 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 444 554 - -
Eupl02g00120 647 Pfam Protein tyrosine and serine/threonine kinase 480 634 IPR001245 GO:0004672|GO:0006468
Eupl02g00120 647 Gene3D Ribonuclease Inhibitor 115 236 IPR032675 -
Eupl02g00120 647 ProSiteProfiles Protein kinase domain profile. 477 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00120 647 SUPERFAMILY L domain-like 25 233 - -
Eupl02g00120 647 MobiDBLite consensus disorder prediction 266 286 - -
Eupl02g00120 647 Gene3D Transferase(Phosphotransferase) domain 1 555 643 - -
Eupl02g00120 647 MobiDBLite consensus disorder prediction 241 286 - -
Eupl02g00120 647 Gene3D Phosphorylase Kinase; domain 1 448 554 - -
Eupl02g00120 647 MobiDBLite consensus disorder prediction 328 359 - -
Eupl02g00120 647 Gene3D Ribonuclease Inhibitor 33 114 IPR032675 -
Eupl02g00120 647 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Eupl02g00120 647 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515
Eupl02g00120 647 SUPERFAMILY Protein kinase-like (PK-like) 456 636 IPR011009 -
Eupl02g00120 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 635 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00120 Eupl-Chr2 1328920 1338730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00120 15 639 Strubbelig Receptor Gene Family AT4G03390 54.758 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Eupl02g00120 PK_Tyr_Ser-Thr 8.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00120 - - ming:122084352 867.07