Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00111 ATGATTATGTCTTTGAAAGCTGCAAGTCTTGGGCTGAACATGGTTGCGGCTTGTCATGTTCTTCTTCTGGACCTATGGTGGAACCCCACAACTGAAGATCAAGCAATCGATAGAGCACATCGGATTGGACAGACTCGTCCTGTTACTGTTTTGCGGTTAACTGTGAAAGATACGGTTGAAGATCGAATATTAGCCCTTCAGCAAAAGAAGAGAGAGATGGTTGCATCTGCATTCGGAGAGGATGAGACGGGTAGTCGCCAGACTCGTCTTACAGTGGAGGACTTGAAATACCTGTTTATGGTGTGA 306 0.4575 MIMSLKAASLGLNMVAACHVLLLDLWWNPTTEDQAIDRAHRIGQTRPVTVLRLTVKDTVEDRILALQQKKREMVASAFGEDETGSRQTRLTVEDLKYLFMV* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00111 101 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 100 - -
Eupl02g00111 101 Pfam Helicase conserved C-terminal domain 2 43 IPR001650 -
Eupl02g00111 101 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Eupl02g00111 101 CDD SF2_C_SNF 1 53 - -
Eupl02g00111 101 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 96 IPR001650 -
Eupl02g00111 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Eupl02g00111 101 Gene3D - 1 101 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00111 Eupl-Chr2 1241489 1242392 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00111 1 100 RAD5 or RAD16-like Gene Family AT1G61140 92.000 1.90e-60 196
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00111 - - ming:122093520 200.29