Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00110 ATGGGTTTTCTCACATGGGTTCTTCTTTGTATATTTGCTATGGAGCCTGTTGTTGGTAGTGTAAGACATGGAGGAGGGTTAGATGAGAAGAAGGTGATCAACATAGTGGGAAGTGAGGATCTTGTCACTGACTTGCCTGGCCAACCCAATGTTGGGTTCCAGCACTATGCAGGTTATGTTAACGTGAACGAAAAGAATGGGAGAGCACTCTTTTATTGGTTCTATGAGGCCTCGACTCATGCGGATGACAAGCCTTTGGTTCTCTGGTTAAATGGAGGTCCTGGGTGTTCTTCTGTGGGATATGGTGCAACACAAGAGATTGGTCCTTTCGTTGTCGATGCAGATGGCCGTGGACTTAAATTCAATCCCCACGCGTGGAATAGAGAAGCCAACATGTTATTCCTCGAATCTCCGGTTGGAGTCGGCTTTTCATACTCAAACACAACTAGTGATTATAATATTCTTGATGATGAATTTACAGCAAATGACACATACACATTCCTGCACAAGTGGTTCATCAAGTTCCCGTTGTATAGAAAGCGGAGTTTCTATATTGCAGGGGAGAGCTATGCAGGAAAATATGTTCCGGAGTTGGCCGAGCTAATTTACGACATGAACAAGGATCCTTCTCTATATATTGATCTCAAGGGTTTCTTGTTGGGCAATCCTGAAACATCGGACGGTGAGGACTGGCAAGGTTTGGTGGATTATGCATGGAGCCATGCTGTTGTATCAGATGAAACTCACAATATTATCATGAAGAGCTGTGATTTTAACAGCAACGATACATGGAGCAACGATGATTGCACCCAAGCAGTGAATGAAGTACTCAAACAGTATGACGAGATTGATATCTATAGCCTTTATACCTCAGTATGCAAGAACACATCAACTGGTTCTGCTTACAAATATTCAATGCAAGTCGTGTTCAAGCCCTCGTCTAAGATGATGCCAAGGATCATGGGTGGTTATGACCCATGCTTGGACAATTACGCTAAAATTTTCTACAACCGACCGGATGTTCAGATGGCCCTCCATGTGAGTGATGGTCATCACCTCAAGAATTGGAGCATCTGCAATGATACAATATTTAAAGAATGGATATATACAAGGCCTTCTGTTATTCCCATATACAAGAAGCTTATAGCAGCAGGACTTAGAATCTGGGTTTACAGTGGGGACACAGATGGAAGAGTTCCTGTGTTGTCTACAAGATATAGTTTGGGTACTTTGGGACTACCTATCACTAAGGCATGGAGGCCTTGGTACCACCAGAAAGAGGTGAGTGGTTGGTTACAAGAGTACAAGGGGCTCACATTTGCAACATTCAGAGGAGCTGGCCATGCAGTTCCTATTTTCAAACCAAGCAGTTCCTTGGCTTTCTTTGCAGCCTTTCTTGCCGGAGAATCTCCACCGTTTGAACGATGA 1428 0.437 MGFLTWVLLCIFAMEPVVGSVRHGGGLDEKKVINIVGSEDLVTDLPGQPNVGFQHYAGYVNVNEKNGRALFYWFYEASTHADDKPLVLWLNGGPGCSSVGYGATQEIGPFVVDADGRGLKFNPHAWNREANMLFLESPVGVGFSYSNTTSDYNILDDEFTANDTYTFLHKWFIKFPLYRKRSFYIAGESYAGKYVPELAELIYDMNKDPSLYIDLKGFLLGNPETSDGEDWQGLVDYAWSHAVVSDETHNIIMKSCDFNSNDTWSNDDCTQAVNEVLKQYDEIDIYSLYTSVCKNTSTGSAYKYSMQVVFKPSSKMMPRIMGGYDPCLDNYAKIFYNRPDVQMALHVSDGHHLKNWSICNDTIFKEWIYTRPSVIPIYKKLIAAGLRIWVYSGDTDGRVPVLSTRYSLGTLGLPITKAWRPWYHQKEVSGWLQEYKGLTFATFRGAGHAVPIFKPSSSLAFFAAFLAGESPPFER* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00110 475 ProSitePatterns Serine carboxypeptidases, serine active site. 185 192 IPR018202 GO:0004185
Eupl02g00110 475 Gene3D - 374 468 - -
Eupl02g00110 475 FunFam Carboxypeptidase 374 468 - -
Eupl02g00110 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 196 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 41 455 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 Gene3D - 327 363 - -
Eupl02g00110 475 Gene3D alpha/beta hydrolase 37 295 IPR029058 -
Eupl02g00110 475 Pfam Serine carboxypeptidase 47 467 IPR001563 GO:0004185|GO:0006508
Eupl02g00110 475 FunFam Carboxypeptidase 36 295 - -
Eupl02g00110 475 SUPERFAMILY alpha/beta-Hydrolases 39 469 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00110 Eupl-Chr2 1230146 1235318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00110 332 469 Calmodulin-binding Proteins AT2G22960 32.857 7.38e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00110 K16297 - msin:131220692 789.26