Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00106 ATGGAGAGCACGGATTCGTCGTCCGGCTCGCAGCAGCCGCAGCTTCCACCAGGCTTCCGGTTCCATCCCACCGATGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAGGCCTCTTCTGTTCCTCTACCCGTTACGATCATCGCTGAAGTTGATCTCTACAAGTTCGATCCATGGGAGCTCCCAGGGAAGGCAACTTTTGGAGAACAAGAGTGGTACTTCTTTAGTCCTAGAGACCGGAAATACCCGAACGGTGCTCGGCCTAACCGAGCTGCGACATCTGGTTACTGGAAGGCAACCGGAACTGATAAGCCTATATTAACCTCTGGCGGGACTCAGAAGGTTGGGGTGAAGAAGGCGCTCGTCTTCTATGGTGGAAGGCCCCCTAAAGGGATAAAAACTAACTGGATCATGCATGAATACCGACTTGTAGACAACAGTGGCAACACGAAACCTCCCGTCATCGACATAGCAAGCAAGAAAAGCTCCTTAAGGCTTGATGATTGGGTGCTTTGTCGGATCTACAAGAAGAACAACTCCCAAAGACCGATGGATCGCGAGAAGGAAGATTCCATGGAGGAGATGCTCGCTTCACTGCCAACCTCAACAATCAATGGACAACATAATCTAAAACCACAGTCTATGAAGACAACAAATTATGGTGCCTTGATGGAAAACGATGAGAACTTCTTCGAGGAACTGTTATCTGAGGATGGTATCAATTGCAATTCCATATCTCAATTGGCTCCTTCGAGCTCCAAGCCAGACCTCTCTCTGAAACGCACCCTACCGTCACCTTACTGGAATGAGGCGGGTGGTATCATGCATCCCTCAGCCAAGAGACTCCATGCTAATCAGAACACCATTAGCGGCACCGGGACCGGCACCATGGAGGGAACTAATTCCATAGCAACTCTTCTCAATCAGCTCCCACAAGCGGCTCCATTCCACCAACATGCGCTTCTTGGGTCTCTTGATGATGGCATTTTCCGACAACCATATCATCTCTCCGGCATGAATTGGAACTCTTAA 1029 0.4966 MESTDSSSGSQQPQLPPGFRFHPTDEELVVHYLKKKASSVPLPVTIIAEVDLYKFDPWELPGKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILTSGGTQKVGVKKALVFYGGRPPKGIKTNWIMHEYRLVDNSGNTKPPVIDIASKKSSLRLDDWVLCRIYKKNNSQRPMDREKEDSMEEMLASLPTSTINGQHNLKPQSMKTTNYGALMENDENFFEELLSEDGINCNSISQLAPSSSKPDLSLKRTLPSPYWNEAGGIMHPSAKRLHANQNTISGTGTGTMEGTNSIATLLNQLPQAAPFHQHALLGSLDDGIFRQPYHLSGMNWNS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00106 342 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Eupl02g00106 342 MobiDBLite consensus disorder prediction 1 20 - -
Eupl02g00106 342 MobiDBLite consensus disorder prediction 1 17 - -
Eupl02g00106 342 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
Eupl02g00106 342 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Eupl02g00106 342 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Eupl02g00106 342 PANTHER NAC TRANSCRIPTION FACTOR 56 15 214 - -
Eupl02g00106 342 FunFam NAC transcription factor 56 24 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00106 Eupl-Chr2 1192929 1195357 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00106 1 342 NAC Transcription Factor Family AT3G15510 51.467 3.08e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl02g00106 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00106 - - nnu:104605624 510.76