Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00105 ATGGGGGTAGCAAATATAGACCCTGTTTCGCAGCTCTCGTTGCCGCCGGGATTCCGATTTTATCCGACGGACGAGGAACTCCTAGTCAACTACTTGTGCCGGAAAGTCGCCGGATATCAATTCTCTTTACCGATTATCGGTGAAGTCGATCTTTACAAGTTCGATCCATGGATCCTCCCCAGTAAAGCTATCTTTGGAGAGAAAGAGTGGTATTTCTTTAACCCCAGAGATCGAAAATACCCGAATGGTTCACGACCAAACAGAGTTGCTGGGTCTGGGTATTGGAAAGCAACTGGGACTGATAAGATTATAACGACAGAGGGTAGGAAGGTTGGAATAAAGAAATCTCTGGTTTTCTATGTGGGGAAAGCTCCGAAAGGATCTAAAACGAACTGGATTATGCATGAGTACCGGCTTTCGGAACCGACACGGAAGAGCGGCAGCACTAAGTTGGATGATTGGGTTCTGTGCCGGATTTACAAGAAAAACTCGAGCACCGAGAAGCCCGATTCGAGTGTTTCGAGTATGACGACAACAGAACACAGCAACGTGTCTACGACGTCATCTTCTCACTTCGACAACGTCATCGAATCACTTCCCGAGATTGATCATCGGTTCTTTGCTCTCCCTCGAATGAATTCTCTCAAAACCCTACAAGATGAGAAATTGAACATCCAAAACAGTGGAAAATTCGACTGGAATAATCTTTCTCCAATGAGTGACTTTCCAGAATTTGTGTCCAACGGTCAAACTCAATGGCAGGCGGATGACCAATACTTTCCGTCAGAAAAATTTGGGAATTCGATAGAAGACGAAGTTGAGAGCGAACTCGGATCACAGCGAGTTGAAAACTCAAGTTTCTTTCAGCAGAATTCGAACGAGTTGACTCAGACCTCTGGCTTTCTTGACCCGTTCGGGATTAGGTACCCTACGCACCCAGCGTTCGGAAGCTTCGGATATCAGCAATGA 969 0.4603 MGVANIDPVSQLSLPPGFRFYPTDEELLVNYLCRKVAGYQFSLPIIGEVDLYKFDPWILPSKAIFGEKEWYFFNPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKSLVFYVGKAPKGSKTNWIMHEYRLSEPTRKSGSTKLDDWVLCRIYKKNSSTEKPDSSVSSMTTTEHSNVSTTSSSHFDNVIESLPEIDHRFFALPRMNSLKTLQDEKLNIQNSGKFDWNNLSPMSDFPEFVSNGQTQWQADDQYFPSEKFGNSIEDEVESELGSQRVENSSFFQQNSNELTQTSGFLDPFGIRYPTHPAFGSFGYQQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00105 322 Gene3D NAC domain 23 167 IPR036093 GO:0003677|GO:0006355
Eupl02g00105 322 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Eupl02g00105 322 MobiDBLite consensus disorder prediction 165 188 - -
Eupl02g00105 322 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Eupl02g00105 322 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 243 - -
Eupl02g00105 322 FunFam NAC domain-containing protein 72-like 23 167 - -
Eupl02g00105 322 MobiDBLite consensus disorder prediction 166 188 - -
Eupl02g00105 322 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00105 Eupl-Chr2 1172436 1174084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00105 1 301 NAC Transcription Factor Family AT4G27410 57.009 3.67e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl02g00105 NAM 2.7e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00105 - - pvy:116146142 456.062