Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00094 ATGGGTTTGAGTTCGAAACAAGTATCAGGGGACGGGCTGGATTGGGCACAGAAGTTGTTGGAAGGTGAAGCCTTAGAAATTCCGAAGGTTCCTCAAGTGAGGCAGCAACAGCAAGTACAACAACAGCAAACAGCGCCGTTGAAGTGTCCGAGGTGTGATTCGAGCAACACTAAGTTTTGTTACTACAACAATTACAACCGATCGCAGCCTCGCCATTTTTGTAAGTCGTGTAGGAGGCACTGGACTAAAGGGGGTACGCTTCGCAATGTTCCGGTCGGTGGTGGACGGAAGAACAAGCGGTTAAAGACCACCAAGACCCCCACAACCACCACCACCACCACTACCAGCAACAACAACGACAACATGGGAATTCAACCACAGCAGCAACAGCAGAATCGACACTTATCTGGGATTCTCTACCCGGCTCTCCTCCACCCTACATCGTTGCAACAGGATTATATCAACAGAAACAATAACAACAACAGCTTCATGGGTTCGACGTCATCACTTCCTCCTCTCCCTAACTTTCCCTTTACAAGTTCTTTCGACAACCCTTCTTCGATGCCGTCCGATTTCACCGGCCGTTTTCAATCGTCCAATGTGTTTAATTACACCGGAGGAACTGAAACTGCTGAGGATCTCACCAACACGCCGATGCCGACACCATGGCAAATCCCAAGTACAAGCAGTTTGATGGATCCGACGAGCTACTGGAGCTGGGATGATCTTAACACACTCATCTCAACTGATCTCAAGCAGCCATGGGAGGATTCTCGAAGCAAACATTTGGGAAGTTAG 798 0.4887 MGLSSKQVSGDGLDWAQKLLEGEALEIPKVPQVRQQQQVQQQQTAPLKCPRCDSSNTKFCYYNNYNRSQPRHFCKSCRRHWTKGGTLRNVPVGGGRKNKRLKTTKTPTTTTTTTTSNNNDNMGIQPQQQQQNRHLSGILYPALLHPTSLQQDYINRNNNNNSFMGSTSSLPPLPNFPFTSSFDNPSSMPSDFTGRFQSSNVFNYTGGTETAEDLTNTPMPTPWQIPSTSSLMDPTSYWSWDDLNTLISTDLKQPWEDSRSKHLGS* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00094 265 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Eupl02g00094 265 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 36 184 IPR045174 GO:0003700|GO:0006355
Eupl02g00094 265 Pfam Dof domain, zinc finger 46 99 IPR003851 GO:0003677|GO:0006355
Eupl02g00094 265 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Eupl02g00094 265 MobiDBLite consensus disorder prediction 88 123 - -
Eupl02g00094 265 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00094 Eupl-Chr2 1021921 1023815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00094 47 127 C2C2-Dof Transcription Factor Family AT5G60850 62.195 3.91e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl02g00094 zf-Dof 1.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00094 - - nnu:104586454 283.493