Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00066 ATGGCCATAGAGCAATACTTCCAGGAACCCATGGTACACCATGAGGCAGAGGTAGAGGGAGATGGATCATCACTGCAGAAGTGGAAATCTGTCTCGGCTGCTGCTGCTGCAACAGCTTCGGACAGCGCTAATGGCTGCTTCGACTGCAACATCTGCCTCGACCATGCCAAGGACCCTGTCGTCACACTCTGTGGTCACCTCTATTGTTGGCCATGCATTTACAAGTGGATCCACTTCCAGAGTGGCTCCACCGCCCCGCAATGCCCTGTCTGCAAGGCTGATGTCTCCCACACTACACTAGTCCCCCTCTATGGCCGAGGCCAGTCCCTCCCACAAATTGAATCTGATGGCAAGGGTCCCTTCTCGGGTCTAGAGATACCACGTAGACCTCCCGCCTGTGATGTTCATGCCCTGATAACTACAACTACTACTACTTCACGTGCTAGTCAGCAACGTCATCGTAGTCGATACCAGTCAGAATCTCAGTTTCAGTTGAATCAGCATCAACAATACTACCCACAACATTACAGCAATTACAATGAGTCTGGGACAGCATCCCCACGAGTCTTCCATCCGATGGTTGGGATGTTTGGGGAGATGGTATACGCAAGGGTGTTTGGAAATGCTACCGACTCGAGTTTCAATGGCTACCCAAACTCTAACCATCTCATGGGTAGTAGTAGTGTTAGTCCTAGAGTGAGAAGACAGGAGATGCAGGCTGAGAAATCGCTTAACAGAATTTCAATCTTCCTATTCTGCTGTTTTGTTTTGTGTCTTCTCCTATTCTGA 789 0.4968 MAIEQYFQEPMVHHEAEVEGDGSSLQKWKSVSAAAAATASDSANGCFDCNICLDHAKDPVVTLCGHLYCWPCIYKWIHFQSGSTAPQCPVCKADVSHTTLVPLYGRGQSLPQIESDGKGPFSGLEIPRRPPACDVHALITTTTTTSRASQQRHRSRYQSESQFQLNQHQQYYPQHYSNYNESGTASPRVFHPMVGMFGEMVYARVFGNATDSSFNGYPNSNHLMGSSSVSPRVRRQEMQAEKSLNRISIFLFCCFVLCLLLF* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00066 262 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Eupl02g00066 262 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 10 105 IPR013083 -
Eupl02g00066 262 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 13 259 IPR045103 GO:0005783|GO:0006511|GO:0061630
Eupl02g00066 262 ProSiteProfiles Zinc finger RING-type profile. 49 92 IPR001841 -
Eupl02g00066 262 SMART ring_2 49 91 IPR001841 -
Eupl02g00066 262 SUPERFAMILY RING/U-box 42 98 - -
Eupl02g00066 262 Pfam Zinc finger, C3HC4 type (RING finger) 49 91 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00066 Eupl-Chr2 702038 707144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00066 12 248 C3H Transcription Factor Family AT4G27470 36.179 2.51e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00066 K10666 - ming:122094110 288.885