Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00034 ATGGGCGGCATTTGTTGTAAGGCTTCTGCTATTGATGACAGTAGGGAGAGTCCGAGGGAGAGGTTTTCGAGTAAAGCGTCGTCGGACTTACGCGTACCTCGACTGGCTTCTTCGAGGAGAGAAGAAATTATTCGAGGGAAAGATAGACCGGATAGTAGAAATGGAAGAGTTACATTGATTGATAAGCAAGGGAACGGTTCGACTCGGTTGCAGACTGAGAATTTTGAGAGGAAGAGGGAGAAGTCTGAGTATCTTGCTACTCATCATCCGAGGGTTGGCAGCATTCCTAAGGCTATAGAAGGGGAGCAGGTTGCAGCGGGATGGCCTGCCTGGCTTGCTGCAGTGGCGGGAGAAGCTATCAGGGGATGGATACCGCGTCGTGCAGATTCTTTTGAGAAACTAGACAAAATTGGCCAAGGAACTTACAGTAACGTATACAGGGCCCGTGATCTCGAACATGGGAAAATTGTTGCTTTGAAAAAAGTGCGGTTTGATAACCTGGAGCCTGAAAGTGTTCGCTTTATGGCAAGGGAAATCCATATTCTACGTCGGCTTGATCATCCAAATATAATAAAGCTGGAAGGCCTAGTAACATCACGGATGTCTTGCAGCTTGTACCTTGTTTTTGAGTATATGGAGCATGATCTTACTGGACTTGCTTCTTTTCCTGGTCTCAAGTTCACAGAACCACAGGTTAAATGTTACATGCAGCAATTGCTACGCGGACTTGATCATTGTCATAGTCGTGGTGTTCTACATCGCGACATAAAGGGTTCAAATCTTTTACTTGACAATAGCGGCATCTTGAAGATTGCGGACTTTGGCTTGGCAAGTTTTTTTGATCCTCATCAAAGTCAGCCATTGACAAGCCGTGTTGTGACTCTTTGGTATCGACCGCCAGAGCTTTTACTTGGAGCCACTCACTATGGAATTGCCATTGATTTATGGAGTACTGGTTGCATACTTGCAGAATTATATGCGAACAAGCCTATCATGCCCGGAAGAACAGAGGTGGAGCAGTTGCATAAGATTTTCAAGCTTTGTGGCTCACCGTCTGAGGAATATTGGAGAAAATCAAAATTGCCACATGCAACAATTTTCAAACCTCAACAACCTTATAGAAGATGTGTTGCAGAAACTTTCAGAGATTTCCCTGCAGCAGCTTTAGAGCTTATGGAGACCCTGCTTTCCATAGATCCTGCAGATCGTGAAACTGCAGCTTCTGCTCTCAAAAGCGAGTTCTTCACAACAAAACCACTGCCTTGTGATCCTTCAAGTTTGCCCAAATATCCTCCAAGCAAAGAGTTCGATGCAAAAGTACGGGATGAAGAAGCTAGAAGGCAAGTGGCAGCAGGAGGCAGGGGCCAGAAGTTTGAATTAGAAAGGAAAGGACCAAGGGAATCTAGGGCAATCCCTGCACCTGATGCCAATGCAGAGTTAGTTTTGTCAATTCAGAAAAGACAAGCTCAGTCCAATTCTAAGAGTCGGAGTGAGAAATTCAACCCTCATAAGGAGGAAGTTGCTTCTGGCTTTCCAATTGACCCACCTAGACAATCACAAGCCGGCGAAGAAGCTAGAAAGGATACGCAAGGGCATTTTCATAAGAGAGCTTCACATTCGGGGCCATTGGTTCACCGTACTGCATGGGCAAAGGCTGGAAAAAACCAGGATGATGCTTTAAAAGTTTCAACTGGGGCCGACTTATCAGCCTTATCTGGTTTAGTAGCAGCAAGGACGAGTTTGTTATGCGATGATCATGGAGAAAAGTCTGGTTCTTCGCATCCAGAAGCAACAAATCCGATCGGCCGAAATCAAGGATCATTCAACGAGGTCTTAGAATCCACTAGAAAGCAGGATCGGAGGCATCTTGAACAGGGTCTTTCAGGTTCTCATCAGAATGAAGATGGAAGGACCGACAAGGACCAAATTCTGCATGGTTATGGGTCCAAGGGCAACAAGATCCACTACTCTGGTCCACTACTGGTTCCTTCAGGCAAGGTAGATCAGATGCTTAAGGATCACGATCGCCAGATTCAAGAAGTCGTTCGACGAGCACGGCTTGACAAGGCGAAAATGAGAAAAGTTCAGGCTGAAGGGACCCAAATACCAACCAATCCAATATTTGCCTCTGGTCATGGAGCCGTATAA 2148 0.4581 MGGICCKASAIDDSRESPRERFSSKASSDLRVPRLASSRREEIIRGKDRPDSRNGRVTLIDKQGNGSTRLQTENFERKREKSEYLATHHPRVGSIPKAIEGEQVAAGWPAWLAAVAGEAIRGWIPRRADSFEKLDKIGQGTYSNVYRARDLEHGKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLTGLASFPGLKFTEPQVKCYMQQLLRGLDHCHSRGVLHRDIKGSNLLLDNSGILKIADFGLASFFDPHQSQPLTSRVVTLWYRPPELLLGATHYGIAIDLWSTGCILAELYANKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQPYRRCVAETFRDFPAAALELMETLLSIDPADRETAASALKSEFFTTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQVAAGGRGQKFELERKGPRESRAIPAPDANAELVLSIQKRQAQSNSKSRSEKFNPHKEEVASGFPIDPPRQSQAGEEARKDTQGHFHKRASHSGPLVHRTAWAKAGKNQDDALKVSTGADLSALSGLVAARTSLLCDDHGEKSGSSHPEATNPIGRNQGSFNEVLESTRKQDRRHLEQGLSGSHQNEDGRTDKDQILHGYGSKGNKIHYSGPLLVPSGKVDQMLKDHDRQIQEVVRRARLDKAKMRKVQAEGTQIPTNPIFASGHGAV* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00034 715 CDD STKc_CDK9_like 131 415 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 586 656 - -
Eupl02g00034 715 SUPERFAMILY Protein kinase-like (PK-like) 124 423 IPR011009 -
Eupl02g00034 715 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 593 612 - -
Eupl02g00034 715 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00034 715 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00034 715 MobiDBLite consensus disorder prediction 1 69 - -
Eupl02g00034 715 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Eupl02g00034 715 MobiDBLite consensus disorder prediction 34 56 - -
Eupl02g00034 715 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 434 469 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 520 535 - -
Eupl02g00034 715 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 421 542 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 12 27 - -
Eupl02g00034 715 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00034 715 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Eupl02g00034 715 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Eupl02g00034 715 MobiDBLite consensus disorder prediction 613 646 - -
Eupl02g00034 715 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00034 Eupl-Chr2 425369 435137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00034 123 454 Core Cell Cycle Gene Families AT5G10270 54.885 4.83e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl02g00034 Pkinase 4.4e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00034 - - nnu:104608220 1186.4