Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00030 ATGGAGGAAGATTCCAACTCTTGGGTGAGGAGGGTGAAATTCTCTCAGACTGTTTTTCATAGGTTGGATTCATCGAGATTGCCATTTGTTCCATTGTCGAGATTGCCCTCTGTTCAACTGGATCGTAATTCCGGATTGAAGTCTAGGCCTGGATCAACCTCTTCTTGTCATAACTCAGGATCTTTTAATGCTCAGATTGTCCGAAATTCTGCCACCAACAAACAGAGATCTTTATCTCCTCTCCCTAAAATTGCCCTTTCCGAGGCGTTTAAGGATGCTCGGACTGATCGGAAGAGATTCTCCACTCCACGTCCTCAAAGAAAAGGACATGATAAGGGAATTATCGGCAAATTGTTCAACAAAGATTCTCATCATATTCGGGCACTCGATTCTTCATCGTCGAGTATGAGCCCTCTCAGGCACTTCTCATCTATGAAAATTTCTGATAAATCAAGTAACCGAAAGGATTCAGCTTGGACCAAGTACTTTGACCATGGTGGGGGAAGAGTCACAGCTGTGGAAACGGCTGATGAATGGATGGTTGATCTCTCCAAATTGTTCCTTGGGCTTAGGTTCGCCAGTGGGGCGCACAGTCGACTTTACCATGGGATATATAAAGATGAGCCTGTTGCAGTGAAAATAATTAGACAGTCTGATGACGACGAAAATGCAGCCATGGCAGCTCGGCTAGAGAAGCAGTTCAATAGAGAAGTTACTCTTCTGTCTCATCTCCACCATCAAAACGTAATAAAGTTGGTAGCGGCATGTAGAAAACCACCTGTCTTTTGTATCATCACGGAATATCTTTCAGGGGGTTCCTTGAGGCCTTTCTTACACAAGCTCGAGCACAAATCACTTCCTTTACAGAAATTGATTACATTTGCTCTGGATATTGCTCGAGGAATGGAGTATGTTCACTCACAAGGTGTCATACATCGTGATCTTAAACCTGAGAATATCCTCTTTGATCAAGACTTCCACTTGAAAGTTGCCGATTTTGGCATAGCTTGTGAGCAGGCATACTGCGATTCTTTGGCCGAAGACCCAGGGACCTATCGTTGGATGGCACCAGAGATGATCAAACACAAACCCTATGGACGGAAGGTTGATGTGTACAGCTTTGGACTTGTGTTATGGGAGATGGTGGCTGGATCAATCCCTTACGAGGATATGACACCCATCCAAGCAGCTTTTGCTGTAGTGGATAAGAACTTGAGACCTGTTATTCCAGTAAACTGTCCACCTGCACTACAAGCTTTGATTGAGCAATGTTGGGCTTTGCATTCTGAGAAGAGGCCGGAGTTTTGGCAGATTGTGAAGGTATTAGAGGAATTCGAGTCTTCACTTGCTCGTGATGGCACGTTGAACCTAGTTCAAAATTTAATTTGCCATGATCACAAGAAGGGGTTACTTCATTGGATTCAGAAACTTAGCCCTGTAAATCCTAATCCTGAGGGTTCACCCGTGCCTAAACCCAAATTTTTCTGA 1488 0.4415 MEEDSNSWVRRVKFSQTVFHRLDSSRLPFVPLSRLPSVQLDRNSGLKSRPGSTSSCHNSGSFNAQIVRNSATNKQRSLSPLPKIALSEAFKDARTDRKRFSTPRPQRKGHDKGIIGKLFNKDSHHIRALDSSSSSMSPLRHFSSMKISDKSSNRKDSAWTKYFDHGGGRVTAVETADEWMVDLSKLFLGLRFASGAHSRLYHGIYKDEPVAVKIIRQSDDDENAAMAARLEKQFNREVTLLSHLHHQNVIKLVAACRKPPVFCIITEYLSGGSLRPFLHKLEHKSLPLQKLITFALDIARGMEYVHSQGVIHRDLKPENILFDQDFHLKVADFGIACEQAYCDSLAEDPGTYRWMAPEMIKHKPYGRKVDVYSFGLVLWEMVAGSIPYEDMTPIQAAFAVVDKNLRPVIPVNCPPALQALIEQCWALHSEKRPEFWQIVKVLEEFESSLARDGTLNLVQNLICHDHKKGLLHWIQKLSPVNPNPEGSPVPKPKFF* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00030 495 MobiDBLite consensus disorder prediction 92 115 - -
Eupl02g00030 495 FunFam Serine/threonine-protein kinase isoform 1 176 270 - -
Eupl02g00030 495 SUPERFAMILY Protein kinase-like (PK-like) 170 442 IPR011009 -
Eupl02g00030 495 PRINTS Tyrosine kinase catalytic domain signature 266 279 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 PRINTS Tyrosine kinase catalytic domain signature 413 435 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 PRINTS Tyrosine kinase catalytic domain signature 369 391 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 PRINTS Tyrosine kinase catalytic domain signature 304 322 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 PRINTS Tyrosine kinase catalytic domain signature 350 360 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 Pfam Protein tyrosine and serine/threonine kinase 192 442 IPR001245 GO:0004672|GO:0006468
Eupl02g00030 495 Gene3D Transferase(Phosphotransferase) domain 1 271 467 - -
Eupl02g00030 495 ProSiteProfiles Protein kinase domain profile. 186 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00030 495 CDD STKc_MAP3K-like 193 442 - -
Eupl02g00030 495 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 92 449 - -
Eupl02g00030 495 Gene3D Phosphorylase Kinase; domain 1 174 270 - -
Eupl02g00030 495 SMART serkin_6 186 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl02g00030 495 FunFam serine/threonine-protein kinase HT1 271 464 - -
Eupl02g00030 495 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Eupl02g00030 495 MobiDBLite consensus disorder prediction 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00030 Eupl-Chr2 399503 403003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00030 1 494 MAP Kinase Kinase Kinase AT5G58950 55.955 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl02g00030 PK_Tyr_Ser-Thr 1.6e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00030 - - qsa:O6P43_031847 733.021