Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00029 ATGGTCCTCCTAGCTAGACTTGCAGAGAAAGAGATGGAAATCCAACATGTTTCATCAAAAACGGATCGGAAGACTATAGAGAGAAACAGGAGAAATTACATGAAGACCCTCTATTCCGAGCTCAGTTCTCTTGTCCCAAATCAAAACTCAAAGGAGGTGATTTCGCTGCCTGATCAACTGGATAAAGCTACAAACTATATTAAGAAGTTAGAGGAAAAATTGGAGAAAATGAAGGAGAAGAAAGAGCATTTAATGGGAATTGATGAAAAGATAAGTAATGGAATGATGGTAGGGCTGAGATCACCTCCTCAAATTGAGATTCACAATATGGGTTCTGCTCTTGAGGTGATTCTGATAAGTGGGTTGGACAGTCAATCCATGTTCTATGCGATTATCCGTGTTCTTCAGGAAGAAGGAGCTGAGGTTGTCAATGCCAGTTATTCTGTTGTAGACGATAAGGTCTTCCACACAATTCATTCAGAGGTTGGAGAATCTGCTCTTGGTTATGGGGCTGCGAGAATATCAAGGAGACTAAAGAAGATTTTCCATGAATTTGTAAATGTTCTTTGA 570 0.3982 MVLLARLAEKEMEIQHVSSKTDRKTIERNRRNYMKTLYSELSSLVPNQNSKEVISLPDQLDKATNYIKKLEEKLEKMKEKKEHLMGIDEKISNGMMVGLRSPPQIEIHNMGSALEVILISGLDSQSMFYAIIRVLQEEGAEVVNASYSVVDDKVFHTIHSEVGESALGYGAARISRRLKKIFHEFVNVL* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00029 189 Coils Coil 60 87 - -
Eupl02g00029 189 Pfam Helix-loop-helix DNA-binding domain 21 71 IPR011598 GO:0046983
Eupl02g00029 189 Gene3D - 9 95 IPR036638 GO:0046983
Eupl02g00029 189 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 17 180 - -
Eupl02g00029 189 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 18 70 IPR011598 GO:0046983
Eupl02g00029 189 SMART finulus 24 76 IPR011598 GO:0046983
Eupl02g00029 189 FunFam Transcription factor bHLH162 12 97 - -
Eupl02g00029 189 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 22 84 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00029 Eupl-Chr2 390936 392428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00029 18 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 46.893 2.19e-44 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl02g00029 HLH 3.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00029 - - nnu:104599406 229.565