Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00022 ATGTTGGGTAACTGCGAGAAGATGGAATGGCCACAGATAGATGAGACGACGGGAGTGATGGGTTCAAGTGGTACGATGATGGAGAAACCTGCAGGTCCGGAACAATCACTCAAGTGCCCTCGTTGTGATTCTTCAAACACAAAGTTTTGTTACTACAACAATTACAGCTTATCTCAGCCTAGACACTTCTGTAAGGCTTGCAAGCGTTACTGGACTAGAGGTGGAACATTGCGTAACGTTCCGGTCGGAGGCGGGTGCAGGAAGAATAAGAAATTCAGAAGGCCCGCGGTCTCCGCTGCTGATAGTACCGCTCCATCACTACTACCCACACATATACCTACTCCTCACATTAATCCATTGTTTTATGGCCTACCCAATGATCATTCTGACATTAATCATCACCCTTTTCCTCAGTTGAGTGCTCACGGATTGAGTTATCCGTTGGCAAATGATGAGAATTATGGAGTTGGCGGGTATAATTGTAGCACTCAAATTCAAGATGTGCCTCCTTCCAACTTTTCTCTGTTTGGAGCTCCATCTTCTACTACTACTCCAAAAAGTACCGTTTCTTTGATCTCTAGACCCACTAGTCATCTTCAGGCCTTATTTCCCTTTTATGATCAGGGGATGATGATGAAAGAAGTTAAAATGGAAGACCGAAGGGACAACAATAATCCGATGGAACCGATTGGTTCCTCAGGTTCATCTTTCTATTGGAATCCGACTAGTGTTGGTGCTTGGCCTGATCTCACCAACTACGGATCTTCGGTCACTTCTTTGATCTAG 786 0.4491 MLGNCEKMEWPQIDETTGVMGSSGTMMEKPAGPEQSLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKKFRRPAVSAADSTAPSLLPTHIPTPHINPLFYGLPNDHSDINHHPFPQLSAHGLSYPLANDENYGVGGYNCSTQIQDVPPSNFSLFGAPSSTTTPKSTVSLISRPTSHLQALFPFYDQGMMMKEVKMEDRRDNNNPMEPIGSSGSSFYWNPTSVGAWPDLTNYGSSVTSLI* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00022 261 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Eupl02g00022 261 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 146 IPR045174 GO:0003700|GO:0006355
Eupl02g00022 261 MobiDBLite consensus disorder prediction 16 37 - -
Eupl02g00022 261 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Eupl02g00022 261 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00022 Eupl-Chr2 322415 324113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00022 37 261 C2C2-Dof Transcription Factor Family AT1G28310 36.770 4.91e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Eupl02g00022 zf-Dof 1.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00022 - - nnu:104599432 265.774