Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl02g00014 ATGGCTCCGAGATCAGAGAAACCTAATGGCGTTAAAGGAGGTAACTGCAACGAGAAAGAGGTGCATTTCAGAGGTGTGAGGAAGAGACCATGGGGACGGTACGCGGCTGAGATCAGAGATCCTGGCAAAAAAAGCCGTGTTTGGTTGGGTACGTTCGATACGGCTGAAGAGGCTGCAAGGGCTTACGACGCAGCCGCTATTGAATTTCGCGGTGCAAAGGCTAAAACTAACTTCCCTCTTCCCTCTGAGAATAACAACAACCAGAGCCCGAGCCCGAGCAGCACCATTGAAACTTCCAGCCAGGACCAGGAGGGATTCTCGCCTGCTCCGGTCGCTGCTCCCTCTCCTTTGGAACTTGATCTACTGCATCGCGGTGGTGGTGGAGGTATTGGTCTTGTCGGTGCTTCCGCCGTTCGATTTCCGTTCAATCACCATCAGCTCACGTCGTCTCCTAGTCTTATAGCGACCGGACAGCCTCTCTTCTTCTTTGATGCAATCATGCGGTCGGAGGAGATGAAGCTTAACAGCCTCAAGTACGACCCTGCCGCGGCTGATTTCCATCTTGGTGGGGTACAGAGCGACTCCGATTCGTCGTCCGTGGTTGATTTTAACTACAATCACCCTAATAGCCCGCCGAGGAGAGTCCTCGGTATTGATCTCAACCTCCCTCCACCGGAAGTCGAATGA 687 0.5328 MAPRSEKPNGVKGGNCNEKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAARAYDAAAIEFRGAKAKTNFPLPSENNNNQSPSPSSTIETSSQDQEGFSPAPVAAPSPLELDLLHRGGGGGIGLVGASAVRFPFNHHQLTSSPSLIATGQPLFFFDAIMRSEEMKLNSLKYDPAAADFHLGGVQSDSDSSSVVDFNYNHPNSPPRRVLGIDLNLPPPEVE* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl02g00014 228 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 MobiDBLite consensus disorder prediction 1 21 - -
Eupl02g00014 228 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Eupl02g00014 228 Gene3D AP2/ERF domain 21 80 IPR036955 GO:0003700|GO:0006355
Eupl02g00014 228 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 15 167 - -
Eupl02g00014 228 MobiDBLite consensus disorder prediction 78 106 - -
Eupl02g00014 228 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Eupl02g00014 228 CDD AP2 22 79 IPR001471 GO:0003700|GO:0006355
Eupl02g00014 228 MobiDBLite consensus disorder prediction 76 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl02g00014 Eupl-Chr2 261460 262146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl02g00014 19 228 AP2-EREBP Transcription Factor Family AT5G44210 42.056 6.72e-45 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Eupl02g00014 AP2 1.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl02g00014 K09286 - nnu:104599451 266.544