Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01938 ATGTCTTCTTCTAACAGGAGAAAGCTCCATCGAAACACCGTCGCAGTCAACGTAGGCTGCGGTTGCCGAAGCTACAAACTCTCCGATATATTCCACCCCAAACAAAAGACCACGACTACTTCCACTCACCAAAACCCCCATCTCCACATCTCTTCTTCTAGCAACATCACCTTCTCTCCTAATTTCCAAGACCCCAAGAGCTCAAAGACATTGATAGAGTTTGGTAGAATTGGTGAGAGCGTAGCAGTTGTGAAGCAGTCCGACGATCCCTATCTCGATTTTCGCAATTCGATGCTTCAAATGATATTGGAGAAGGAAATTTACGGCAGAGATGATCTCCGACACCTCCTCGACTGCTTCCTATCGTTGAATTCCCCTTACCACCATGCGATCATCGTTCGAGCTTTCACGGAGATCTGGAATGGACTCTTCGACTCCTCCAAACCGCGAGTTGGCCCAACGTCACGTGAGTTATAG 477 0.478 MSSSNRRKLHRNTVAVNVGCGCRSYKLSDIFHPKQKTTTTSTHQNPHLHISSSSNITFSPNFQDPKSSKTLIEFGRIGESVAVVKQSDDPYLDFRNSMLQMILEKEIYGRDDLRHLLDCFLSLNSPYHHAIIVRAFTEIWNGLFDSSKPRVGPTSREL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01938 158 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Eupl01g01938 158 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 42 147 IPR038933 GO:0045892
Eupl01g01938 158 ProSiteProfiles OVATE domain profile. 83 142 IPR006458 -
Eupl01g01938 158 Pfam Transcriptional repressor, ovate 87 144 IPR006458 -
Eupl01g01938 158 NCBIfam uncharacterized plant-specific domain TIGR01568 81 144 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01938 Eupl-Chr1 41411224 41412097 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Eupl01g01938 Ovate 6.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01938 - - nnu:104589762 179.874