Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01935 ATGCAGAAGACAACGAGGCCTGAGCGAAAGGGAGCGATACTTGAGTACCCATCGCGGCCTCCACTCACGTACACCGGTGACTCCAACAGGTCCCATGAGAAAAAATCGGAACAAGCTGTCCACCTTGAATTTCATAAAAGCAGCAACCAAGAAAGTAGGTGGTGCGTGCAACACTTGTCGAAGCAACGAAGCCACAAAGTTCCATTAGAAGTTCCTACAGGAAGCAACAGTAAAAGTTCGAAGAATGTCAATTACTCCTATAGCTCTACCAACATTGCAAGTGCAGAGGTGGGGATAATAACATTCTCGATCGAAGAGATTTATAAGGCTACCGCAAATTTCTCCCCAGCAAACATAATTGGGCAAGGAGGGTTTGGTACAGTCTATAAGGGGAAACTCAGGGATGGATCTTTTGTTGCCATAAAGCGTGCTAAAAAGAACATGTCCGACACGCACCTATCAACAGAATTCAAGAATGAAATCCAAACCCTGTCAAAGATTGAACATTTAAATTTGGTAAGGTTTCTAGGGTACCTGGAGTATGAAGAGGAACGGTGTATTGTAGTTGAATATGTTGGCAATGGGACACTGCGGGAACATCTGGATGGTTCTCGGGGGGATAGGCTGGAGCTTGCAGAACGGCTGGAAGTTGCCATTGATGTTGCTCATGCAGTCACCTATTTGCACATGTATACAGATTGCCCAATCATACACAGAGACATAAAAGCATCAAACATTCTCATCACAGAGAAACTCCGGGCCAAAGTGGCAGATTTTGGGTTGGCTCGTTTGGCTGCAGAGGATCCTGGTGCTACTCACATTTCCACGCAAATTAAAGGAACTGCAGGCTACATAGATCCTGAATACCTCAGAACATATCAACTAACAGAAAAGAGTGATGTGTACTCCTTTGGCGTATTGCTCGTGGAACTTATGACTGGAAGGCAACCAATCGAACCAAAGAGGGGGATCAAAGAGCGAATTACAATCAAATGGGCCATGCAGAAAATGAATGGAGGAGACGCAGTACTAGTGATGGATCCGTGGCTACGGAGGAGTCCGGTGGCAAACCTGGCTGTGGAAAAGGTCCTCGAGCTTGCTATCCAATGCGCCGCTCCTTCAAGGCAGATGAGACCCTCCATGAAGAAATGTGCGGAGGTCCTATGGGGAATTCGAAGAGATTACAGAGAGACTGGTGGTTTGTCTTCTTCTTCTACAGACATCCTCGGAAGGGAAGTGAAAGAATTTCGTATCTAA 1257 0.4606 MQKTTRPERKGAILEYPSRPPLTYTGDSNRSHEKKSEQAVHLEFHKSSNQESRWCVQHLSKQRSHKVPLEVPTGSNSKSSKNVNYSYSSTNIASAEVGIITFSIEEIYKATANFSPANIIGQGGFGTVYKGKLRDGSFVAIKRAKKNMSDTHLSTEFKNEIQTLSKIEHLNLVRFLGYLEYEEERCIVVEYVGNGTLREHLDGSRGDRLELAERLEVAIDVAHAVTYLHMYTDCPIIHRDIKASNILITEKLRAKVADFGLARLAAEDPGATHISTQIKGTAGYIDPEYLRTYQLTEKSDVYSFGVLLVELMTGRQPIEPKRGIKERITIKWAMQKMNGGDAVLVMDPWLRRSPVANLAVEKVLELAIQCAAPSRQMRPSMKKCAEVLWGIRRDYRETGGLSSSSTDILGREVKEFRI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01935 418 ProSitePatterns Protein kinases ATP-binding region signature. 120 146 IPR017441 GO:0005524
Eupl01g01935 418 Pfam Protein tyrosine and serine/threonine kinase 118 388 IPR001245 GO:0004672|GO:0006468
Eupl01g01935 418 Gene3D Transferase(Phosphotransferase) domain 1 192 406 - -
Eupl01g01935 418 CDD STKc_IRAK 120 388 - -
Eupl01g01935 418 SMART serkin_6 114 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01935 418 ProSiteProfiles Protein kinase domain profile. 114 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01935 418 MobiDBLite consensus disorder prediction 1 39 - -
Eupl01g01935 418 SUPERFAMILY Protein kinase-like (PK-like) 91 391 IPR011009 -
Eupl01g01935 418 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 64 395 IPR044652 GO:0004672
Eupl01g01935 418 FunFam receptor-like protein kinase FERONIA 75 191 - -
Eupl01g01935 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Eupl01g01935 418 Gene3D Phosphorylase Kinase; domain 1 74 191 - -
Eupl01g01935 418 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 192 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01935 Eupl-Chr1 41385078 41389721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01935 96 408 Receptor kinase-like Gene Family AT3G58690 38.245 1.42e-69 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Eupl01g01935 PK_Tyr_Ser-Thr 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01935 - - nnu:104597013 497.278