Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01920 ATGGTGAAGGGACGTCAAGGGGAGCGAGTCAGACTCTATGTGAGAGGAACAATTCTCGGATACAAGAGGTCGAAATCGAACCAGTACCCAAACACGTCGTTGATCCAGATCGAAGGCGTGAATACCAAGGAGGAGGTCGCGTGGTACTGCGGAAAGCGCATGGCCTACATTTACAAGGCTAAGGTTAAGAAGAACGGATCCCACTACCGTTGCATTTGGGGAAAGGTCAACAGGCCGCATGGTAACAGCGGAGTTGTTCGTGCTAAGTTCAAGTCTAATTTGCCCCCCAAATCCATGGGTGTTCCCGATTTTCTTGAATTGAAAATAGGAATTAAATACTTGGAATTCACAGTTGAATTCGGAAAGCTCCCAAATGGGACCCAAACAATTTACATGTGTGCATACAGCAATTGTAGGATGGCTTCTACCCGTCCTGAGCTGTTATATTTAATATCCAATCGAGTCTGCAATCAGCATTGCATAAACAAGCATTTGAAATTTCAATCGAGAATCCCAATTCTCACTCCTAAGGATGGTGACAAGGAAATGGACGAGTGA 558 0.4516 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRMAYIYKAKVKKNGSHYRCIWGKVNRPHGNSGVVRAKFKSNLPPKSMGVPDFLELKIGIKYLEFTVEFGKLPNGTQTIYMCAYSNCRMASTRPELLYLISNRVCNQHCINKHLKFQSRIPILTPKDGDKEMDE* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01920 185 Gene3D translation elongation factor selb, chain A, domain 4 6 102 IPR038661 -
Eupl01g01920 185 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 106 IPR001780 GO:0003735|GO:0005840|GO:0006412
Eupl01g01920 185 ProSitePatterns Ribosomal protein L35Ae signature. 74 95 IPR018266 GO:0003735|GO:0005840|GO:0006412
Eupl01g01920 185 Pfam Ribosomal protein L35Ae 12 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
Eupl01g01920 185 FunFam 60S ribosomal protein L35a 7 103 - -
Eupl01g01920 185 SUPERFAMILY Translation proteins 12 100 IPR009000 -
Eupl01g01920 185 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 100 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01920 Eupl-Chr1 41247089 41254179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01920 1 100 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 92.000 2.60e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01920 K02917 - ming:122070259 211.46