Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01905 ATGAAGAAGGAGATAGTAGGGAGGGGCGGTGAGGGTGGCGATGTCGGAACAGCAGTCGGGGCTGCAGTGGGAGACGGTAGCGGGAGCAGCAACCGAGTCGGGAGTGGGTCTGATGACCGAGTTAAGGGGCCTTGGTCTCCTGAGGAAGACGCGATTCTGAGTCGACTCGTGAGCAAGTTCGGGGCGAGGAATTGGAGCCTCATCGCCCGAGGAATCTCCGGACGGTCCGGCAAGTCGTGTCGGCTCCGGTGGTGTAATCAGCTCGATCCTTGTGTCAAACGCAAGCCCTTCTCTGATGAAGAGGATCGGATCATAGTTGCTGCCCACGCAATTCATGGAAACAAATGGGCATCAATTGCAAGGCTGCTACAAGGGAGAACTGACAATGCGATAAAAAATCACTGGAATTCTACACTGAGGCGCAGGTGCATTGAGCTTGATAGGTTTAAGCCAGAATCTGGCGAGATGTTAGAAGATGCTAGCCTGGACAAAACCAAAGCATCCTCGGAAGAAACGCTGTCATGTGGGGACGTCAATTCTTTCAAGTCCTTGGAAGGAAAAGATGTTAACTCTCAGGAGAACATATCCAACCAGTATGAAGACAGGGCTCAAAGCAAAGAGGATCATTGTAGTACTGAAGCAGAAGACCCACCTACACTCTTCCGTCCAGTAGCACGTCTTAGTGCATTTAGCATTTATAATCCTCCAGATGGCCACACAACTGGCTCTTCATTGTCAAGAAGGGTCCCACTTCATGGGCCTTTGGTTCAAGCCTCGAAACCAGATGGTGGGATCTGCAAGTTGCTCGAAGGTGTTTGTGGAGATCCCCTGGTGCCACCCCGATGTGGGCATGGTTGCTGTGGTGCTCAAAGTGGGGAACATCTTCAAAACTCACTGTTGGGCCCTGAGTTTGTTGAATATGCGGAGCCTCCACCCTTCTCAAGTCATGAATTGGCCTCAATAGCAACTGATTTAAGTAATATTGCATGGCTGAAGAGTGGGTTGGAGAATACTGGCACCAAAATAATGGATAATGCAACTGGTTGGGGGATGTCTCAAGGGGGTGATGTCCAAATAGGACGTCTGGAAGAGAGTAGGAAGAATGACCATTTACGATTTGAAGAGGGAAGGAACAAGTTAATGGGCATGATGACAGAAGTGTTATCATCCCAGATGGCTAGGCAACCTTTTGCACTGCCGGCTAAAAGTTGA 1212 0.5 MKKEIVGRGGEGGDVGTAVGAAVGDGSGSSNRVGSGSDDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGISGRSGKSCRLRWCNQLDPCVKRKPFSDEEDRIIVAAHAIHGNKWASIARLLQGRTDNAIKNHWNSTLRRRCIELDRFKPESGEMLEDASLDKTKASSEETLSCGDVNSFKSLEGKDVNSQENISNQYEDRAQSKEDHCSTEAEDPPTLFRPVARLSAFSIYNPPDGHTTGSSLSRRVPLHGPLVQASKPDGGICKLLEGVCGDPLVPPRCGHGCCGAQSGEHLQNSLLGPEFVEYAEPPPFSSHELASIATDLSNIAWLKSGLENTGTKIMDNATGWGMSQGGDVQIGRLEESRKNDHLRFEEGRNKLMGMMTEVLSSQMARQPFALPAKS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01905 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 88 IPR017930 -
Eupl01g01905 403 SMART sant 93 141 IPR001005 -
Eupl01g01905 403 SMART sant 41 90 IPR001005 -
Eupl01g01905 403 Pfam Myb-like DNA-binding domain 45 102 - -
Eupl01g01905 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 143 IPR017930 -
Eupl01g01905 403 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Eupl01g01905 403 FunFam MYB transcription factor 42 93 - -
Eupl01g01905 403 Gene3D - 41 93 - -
Eupl01g01905 403 PANTHER MYB PROTEIN-RELATED 42 196 - -
Eupl01g01905 403 CDD SANT 96 139 IPR001005 -
Eupl01g01905 403 Gene3D - 95 171 - -
Eupl01g01905 403 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
Eupl01g01905 403 MobiDBLite consensus disorder prediction 1 45 - -
Eupl01g01905 403 SUPERFAMILY Homeodomain-like 40 135 IPR009057 -
Eupl01g01905 403 CDD SANT 44 86 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01905 Eupl-Chr1 41095092 41102998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01905 40 384 MYB Transcription Factor Family AT3G55730 49.020 1.56e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g01905 Myb_DNA-bind_6 2.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01905 K09422 - nnu:104601164 636.721