Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01901 ATGATGATGTGGATGTGGGGAGATGCAGATAAGCAGAAAGCTGGAACCGGAAAGGAGGAAGCGAGGTCAGTAGGTCAGTTACGGAACGAACGGTTGGCGAATCTAATCGGATGCTGTTGCGAAAGCAACGAGAGATTGCTCGTCGCTGAGTTCATGTCGAATGAAACCCTCGCGAAGCATCTCTTCCACTGGGAGACCCAGCCCATGAAATGGGCGATGAGGTTGAGAGTGGCATTGTATTTGGCACAAGCTTTGGAACTTTGCAGCAGTAAAGGACGGGCGCTGTATCATGACCTCAATGCTTATCGTGTTTTGTTTGATAAGGATGGTAATCCCAGGCTCTCATGCTTTGGCCTCATGAAGAATAGCAGAGATGGAAAGAGTTACAGTACAAACTTGGCTTTCACCCCTCCAGAATACTTGAGGACAGGAAGAGTAACACAAGAAAGTGTAGTTTACAGCTTTGGCACCCTATTGCTTGATCTACTTAGTGGCAAACATATTCCCCCAAGCCATGCACTTGACCTGATACGTGGCAAGAATTTTCTGATGCTGATTGATTCTTGTTTGGAGGGTCATTTCTCAAATGACGACGGAACAGAGTTGGTGCGATTAGCTTCTCGTTGTTTACAATATGAAGCTCGTGAGAGGCCAAATGCAAAGTCACTTGTGACTGCTCTCACTTCTCTTCAGAAAGAAACAGAGGTTCCATCACATGTTTTGATGGGCATTCCTCATGGAAATGCATCCTCAATGCAACCATTGTCGTTAACACCTTTAGGTGAAGCTTGCTCCAGAATGGATCTCACTGCCATACATGAAATTTTGGAGAAGATTGGATACAAGGATGATGAAGGGATTGCAAATGAGCTTTCTTTTCAAATGTGGACGAACCAAATGCAGGAGACCTTGAATTCTAAGAAACACGGAGACACTGCTTTTCGAGCTAAAGATTTTGCAACTGCCGTCGATTGCTACACACAGTTCATTGATGGTGGAACCATGATTTCACCAACTGTATTTGCTCGCCGCTGCTTGGCTTACTTGATGAATGACATGCCGCAAGAAGCCCTTGGAGACGCTATGCAAGCCCAGGTGATCTCCCCCGAGTGGCCCACTGCTTTCTATCTTCAAGCTGCTGCACTCTTCAGCCTCGGGATGGATACCGACGCCCAAGAGACACTCAAGGATGGCACAGCCTTGGAGGCCAAAAAGAACAGCAGAAACTGA 1230 0.4667 MMMWMWGDADKQKAGTGKEEARSVGQLRNERLANLIGCCCESNERLLVAEFMSNETLAKHLFHWETQPMKWAMRLRVALYLAQALELCSSKGRALYHDLNAYRVLFDKDGNPRLSCFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTQESVVYSFGTLLLDLLSGKHIPPSHALDLIRGKNFLMLIDSCLEGHFSNDDGTELVRLASRCLQYEARERPNAKSLVTALTSLQKETEVPSHVLMGIPHGNASSMQPLSLTPLGEACSRMDLTAIHEILEKIGYKDDEGIANELSFQMWTNQMQETLNSKKHGDTAFRAKDFATAVDCYTQFIDGGTMISPTVFARRCLAYLMNDMPQEALGDAMQAQVISPEWPTAFYLQAAALFSLGMDTDAQETLKDGTALEAKKNSRN* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01901 409 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 19 406 IPR045845 GO:0004672|GO:0009742
Eupl01g01901 409 Gene3D Tetratricopeptide repeat domain 301 409 IPR011990 GO:0005515
Eupl01g01901 409 Pfam Protein tyrosine and serine/threonine kinase 14 227 IPR001245 GO:0004672|GO:0006468
Eupl01g01901 409 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01901 409 FunFam probable serine/threonine-protein kinase At5g41260 53 244 - -
Eupl01g01901 409 FunFam probable serine/threonine-protein kinase At4g35230 301 409 - -
Eupl01g01901 409 SUPERFAMILY TPR-like 305 405 IPR011990 GO:0005515
Eupl01g01901 409 SUPERFAMILY Protein kinase-like (PK-like) 17 238 IPR011009 -
Eupl01g01901 409 Gene3D Transferase(Phosphotransferase) domain 1 53 245 - -
Eupl01g01901 409 Gene3D Phosphorylase Kinase; domain 1 6 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01901 Eupl-Chr1 41055459 41062177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01901 27 230 Glycoside Hydrolase AT3G07070 35.931 5.90e-31 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Eupl01g01901 PK_Tyr_Ser-Thr 6.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01901 - - msin:131252679 740.725