Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01876 ATGGCGGAGGGTTTTGAACCCTTTCATGTCCCACAACAAAGCCGAAGAGATAAGCTTAGAGTTGTCGGTCAAAACCACCCCAGTTGCGACGGAGCAGCCACTCTTCATGGTTGCGCAGGTTTACTCCCTCTCTATGATCCATCCCTAGTACCTTCTGACATGTTAACCTGCGGAGGTGGGGATGCTTGTAAGCAAACCCCAGTTTGTATTTCTTCAGTTATTAAGGAAGAAGGAGTGAATTTTATGGGTTATGCTGGTGGGTTTATGAATACTGCTTCATCTTCTTCTTCATCTCACCATCATCCTTTCTTGGATCCACAGTCTTCTCTTCCTGTAAATGTAAACCCTAGCTCGATTCAAGATATTAACAACAACCCATTTCTTTATACGGCTCAAAACCTTAGAGATTTTGATCAATCGTTTAATGGTGGAGATATCGTGACGTTTAAACCAGAACAACCCTTGTCGTTAACTCACGATTCGACGACGACTGGACAAGGGTTGTCTTTGTCTCTGTCTTCTCATCATACCCGCCAACATAATCTCCCTCTAGAATTGAATCTGCCACGCTACGACCCCGTGATGTTCGACGAAAAGGGTATCGGAGGGTATTTAGTTCGGGGGATTGTCGGAGGTAGTGCGTCGACATCGAACGATGTGTCGAGGAGTTCAGTTCCTCTCGGGCCATTTACAGGCTATTCTTCGATCTTGAAAGGATCGAGGTTCTTGAAGCCTGCACAACAACTCTTGGAAGAGTTTTGTGATGTGGGTCGAGGAATTTATGCTGAAAGGAGCTGTGGAGATTCATCTTTGATGGATCCTCCAATGGAAACTTTGAATGGGGCTGGGATCATTGATGATTCGCTCAGTTGCAGCGATCGCAGCGAGCATCGGAGGAAGAAGACGAGGTTAATTTCGATGTTGGACGAGGTTTACAGGAGATACAAGCTGTACTACCAGCAGATGCAGGCAGTTGTTGCATCATTTGAATCCGTTGCAGGGCTTGGCAATGCAGCTCCTTACACATCATTTGCACTCAATGCCATGTCAAAGCACTTCAGATGCTTGAAGAATGCCATTACTGACCAACTTCGCTTCACAGGCAAAGCTCTCGGTGGGGGAAGCTTTAGTAAAGATGAGGCTCTGAGGTTTGGAAGCACCGATCGAGGTCCTCCTAGCCAAAGACCAGTTCAAAATGTGGGCATTCTTGAACACCAACATGTTTGGCGACCCCAAAGAGGACTTCCAGAAAGAGCAGTAGCCGTGCTAAGGGCATGGTTGTTCGAACACTTCCTACACCCGTATCCTACTGACACTGACAAGCAAATGTTGGCTAAACAAACTGGTCTATCAAGAAGCCAGGTTTCAAACTGGTTCATTAATGCAAGAGTTAGACTTTGGAAGCCAATGGTGGAAGAAATACACATGCTCGAAACACGGCAAGCTCCAAAAGTTGGTGAAATGGAGGACCAAAACACCAGCAAGCCAAATGAGCCACACACACAAAACGCACCCCCTTCTGATAAACAACCCCAAAACAGCCCCATGCTCAAGGCCCAAGACCCTCCATCAAAACGTACTAGAAACGAACTTCTCCATATACCCGACAAGGATAATGAACCAGTGAACTTCTCTTATAACGATTTGTCAAGCCATCACCATGTCGGAGTCGGAGTCGGCACTGCCGGTGGAAATAGTGGGGTCTCTCTAACATTGGGTCTCCGCCAAAATAACGGAATCGGCTTGTCAGAGCCTTTCCCAATGAACATTGCTCATCGTTTCGGACTTGAAGCAAGTAATGAGGGATATGTCATGGGTGGTTTTGAAGCCCCAAACCGGCACTTCGGGAAAGATATCGGAGGACAATTGCTACATGATTTTGTTGGGTGA 1890 0.4661 MAEGFEPFHVPQQSRRDKLRVVGQNHPSCDGAATLHGCAGLLPLYDPSLVPSDMLTCGGGDACKQTPVCISSVIKEEGVNFMGYAGGFMNTASSSSSSHHHPFLDPQSSLPVNVNPSSIQDINNNPFLYTAQNLRDFDQSFNGGDIVTFKPEQPLSLTHDSTTTGQGLSLSLSSHHTRQHNLPLELNLPRYDPVMFDEKGIGGYLVRGIVGGSASTSNDVSRSSVPLGPFTGYSSILKGSRFLKPAQQLLEEFCDVGRGIYAERSCGDSSLMDPPMETLNGAGIIDDSLSCSDRSEHRRKKTRLISMLDEVYRRYKLYYQQMQAVVASFESVAGLGNAAPYTSFALNAMSKHFRCLKNAITDQLRFTGKALGGGSFSKDEALRFGSTDRGPPSQRPVQNVGILEHQHVWRPQRGLPERAVAVLRAWLFEHFLHPYPTDTDKQMLAKQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQAPKVGEMEDQNTSKPNEPHTQNAPPSDKQPQNSPMLKAQDPPSKRTRNELLHIPDKDNEPVNFSYNDLSSHHHVGVGVGTAGGNSGVSLTLGLRQNNGIGLSEPFPMNIAHRFGLEASNEGYVMGGFEAPNRHFGKDIGGQLLHDFVG* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01876 629 MobiDBLite consensus disorder prediction 479 527 - -
Eupl01g01876 629 Pfam Homeobox KN domain 426 465 IPR008422 GO:0003677|GO:0006355
Eupl01g01876 629 CDD homeodomain 409 470 IPR001356 GO:0003677
Eupl01g01876 629 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 110 495 - -
Eupl01g01876 629 Pfam Associated with HOX 236 361 IPR006563 -
Eupl01g01876 629 SMART prehox3 231 362 IPR006563 -
Eupl01g01876 629 SUPERFAMILY Homeodomain-like 411 476 IPR009057 -
Eupl01g01876 629 MobiDBLite consensus disorder prediction 486 520 - -
Eupl01g01876 629 FunFam BEL1-like homeodomain protein 9 412 474 - -
Eupl01g01876 629 Gene3D - 412 474 - -
Eupl01g01876 629 ProSiteProfiles 'Homeobox' domain profile. 406 469 IPR001356 GO:0003677
Eupl01g01876 629 SMART HOX_1 409 473 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01876 Eupl-Chr1 40810592 40818050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01876 1 629 Homeobox Transcription Factor Family AT5G02030 42.489 5.79e-122 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Eupl01g01876 POX 3.4e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01876 - - nnu:104597071 917.916