Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01873 ATGGCCTTACAAGGGCAGGGAATCGCTCCTGCCATTCTCGACGATATCATAAATCGGCTTTTGGAAGTCCGGTCGTCGAGGCCAGGCAAGCAGGTTCAGCTCTCGGAGGCCGAGATCCGGCAGCTTTGCGTTGCTTCCAAAGATATCTTCATCCAACAACCCAATCTGTTAGAGCTCGAGGCGCCGATCAAGATTTGTGGTGACATTCATGGACAATATAGTGATCTTTTGAGACTTTTCGATTATGGGGGTTTTCCTCCCCAAGCCAATTATTTATTCTTAGGAGATTATGTGGATCGTGGCAAACAGAGTTTGGAAACAATATGCCTTCTTCTTGCTTATAAAATCAAATACCCAGAGAACTTTTTCCTTCTAAGAGGAAATCATGAATGTGCTTCTATTAATCGGATATATGGATTTTATGATGAATGTAAACGTCGGTTTAATGTGAGACTATGGAAAGTCTTTACTGACTGCTTTAACTGCCTTCCTGTGGCGGCTCTTATAGACGAAAAAATATTATGCATGCATGGTGGCCTTTCCCCAGATTTGACAAATTTGGATCAAATAAAAAGCTTAACACGTCCGACCGATGTTCCAGACACCGGTCTTCTCTGTGACTTACTCTGGTCAGATCCTGGTAGAGATGTTAAGGGGTGGGGAATGAATGACAGAGGGGTCTCACACACCTTTGGCCCTGATAAAGTGTCAGAATTCTTAATGAAGCACGAATTGGACCTTGTCTGTCGTGCCCATCAGGTTGTGGAGGATGGGTATGAATTCTTTGCTGACAGAAAACTTGTTACAATATTCTCAGCCCCCAACTACTGTGGTGAATTTGATAATGCCGGTGCAATGATGAGTGTTGATGAAAGTTTAATGTGCTCTTTCCAAATTCTTAAGCCAGCAGAAAAGAAGACAAAATTCATGATGCCAAACAAAATATGA 948 0.4272 MALQGQGIAPAILDDIINRLLEVRSSRPGKQVQLSEAEIRQLCVASKDIFIQQPNLLELEAPIKICGDIHGQYSDLLRLFDYGGFPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLTNLDQIKSLTRPTDVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSHTFGPDKVSEFLMKHELDLVCRAHQVVEDGYEFFADRKLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQILKPAEKKTKFMMPNKI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01873 315 Gene3D - 9 313 IPR029052 -
Eupl01g01873 315 ProSitePatterns Serine/threonine specific protein phosphatases signature. 125 130 IPR006186 GO:0016787
Eupl01g01873 315 FunFam Serine/threonine-protein phosphatase 60 313 - -
Eupl01g01873 315 Pfam Serine-threonine protein phosphatase N-terminal domain 13 60 IPR031675 -
Eupl01g01873 315 Pfam Calcineurin-like phosphoesterase 62 254 IPR004843 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 91 118 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 187 214 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 266 282 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 158 184 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 244 264 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 62 89 IPR006186 GO:0016787
Eupl01g01873 315 PRINTS Serine/threonine phosphatase family signature 124 148 IPR006186 GO:0016787
Eupl01g01873 315 SMART pp2a_7 34 304 IPR006186 GO:0016787
Eupl01g01873 315 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 16 307 - -
Eupl01g01873 315 CDD MPP_PP1_PPKL 13 302 - -
Eupl01g01873 315 SUPERFAMILY Metallo-dependent phosphatases 21 309 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01873 Eupl-Chr1 40740142 40766998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01873 63 248 Calmodulin-binding Proteins AT5G63870 34.389 1.28e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01873 K06269 - nnu:104597075 619.387