Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01868 ATGGCTCAATCAACGAGCAGAGCTAGGGTTGTCGGGGACTACATCGTGGGTCCACAGATCGGATCGGGGTCGTTCTCTGTTGTCTGGCACGCAAGGCATCGAGTCCATGGCACGGAGGTCGCTATTAAGGAGATCGTGATGGATCGGTTGAGCAAGAAATTGCAGCAAAGTCTCTTGTCGGAGATTGTAATCCTCAAGAAGATCAACCATCCTAATATTATTCGCTTGCACGACATCATCGAGGTTCCTGGGAGAGTACATCTTATATTGGAGTATTGCAGAGGTGGGGATCTTTCTATGTATATTCAACGTTATGGAAGAGTTCCTGAAGCAAATGCAAAGCACTTCATGCAGCAGCTAGCTGCCGGTCTACAAATCCTCCGTGAAAATAATCTTATACACCGAGATCTGAAGCCACAGAATCTCCTCCTCTCCACAAATGACAATCATTCTATATTGAAGATTGCAGATTTTGGCTTTGCGAGGTCTCTACAACCTAGAGGCCTAGCGGAAACATTGTGTGGTTCGCCTCTCTACATGGCTCCAGAAATTATGCTGCTCCAAAAATACGATGCAAAGGCAGATCTCTGGAGTGTTGGTGCTATCCTATTTCAGCTTGTGACTGGGAAAACCCCATTTACAGGAAATAACCAAACCCAGTTGCAGCAAAACATTATGAAGTCAAATGAGTTGCGCTTCCCTCCGGATAATAAGGATTTGAGTTCTGACTGCATTGATTTATGTCAGAAGCTGTTGCGCCGTAATCCAGTGGAACGGTTGACATTTGAAGAGTTTTTTAACCACCCATTTCTTTCTCCTAATGAACCAGAAGAACCATTGAGTAGGACAGCATTGAGGACAATAGATAGTTTTCCGTCGGCCAAATCCAATCTTGGGGGGCACACAGAAGAAAGTTCTCAAGATAATTGCCTGCCTTTCCTTTTAGATGATGATTCTGGTGGTCTTGATGGCAGTACATTCTTTTCTTCAAAGAAGGCTGCGATGATATCTACTTACGGATTTTCTCTTGCTACAAAAGTTGATAAAAAGGTTGAAGCTTGTAACATTTCCACCAACATGGATATTGCTTTCAGATATAGTAGTGTATCTTGTAAAGTGGAAACTACTGGTTTTAAGTTTGATCACCATAGACCTTCAGACGGAAATATCAAAGAACCCATAATGGCCGTGGACCAAACACCAATGAAGGATTCTTCTGGAGTTGTGGATTCATTGGAGTTCATTGATCAGGATTATGTTATTGTGCCCGCCCCTCTTGTGGGGGTGACATCTTCATCAGTAAGTGCATCCAGGCTACACCATTCACCATGCAAATCAGAGAATTCCTCCCTAGGATCTCTAAATAGAAAGAGTACATTAAGTGCACCCATGCCAATTATTGGTGCAGCAATCAGTAACAATTGTGGGGTTGGAAGCTTGGAAAGTCATAGCTCTGTGCCGTCTGGGACTTCACAAGGATCAATGGATGTGGGAGATGCTTTGGAGCTGCCATCCGATCACTGTTTTACAAGGATTAGGTTGTTGCAGGAGTGTGCATCTGCCATTACAGAATTAGTGACTGAGAAGATTGATGCAGGGAGGCAGTTAGAAGCCTTCTCAATTCAGCTGGTAATTCTAGCAATTTGGAGGCAAGCACTGCATATTTGCCATACACAGGCTGCCTCGGCGATTGAAGGAAGTCCGACCCAAGAGACAACTCTAGTTAGGGGAAGCACCAACAAGAAGCATAGTAGTCTCGATATCCAAGAATGTCTTATTGTTGACACTCAAGGGCCTGAGGCCGTTTTCTCCCAGATTGAGAGGGAATTTCTTCTTGAAGTTGGGTATGCCGAGGAGCTTGCAAGGGCTCTTGAGCCAATTGATGGAAGTACAGAGATGCCAGATGCGATGGAGACTATATTCCAATCTGCCCTTGCATTGGGCAGACATGGCGCTGTCGATGAACTGATGGGCGATACAGAGAGTGCAGTGTCCCTGTATTCAAAAGCTGTACGTTTGCTATTATTTCTTCTAGCGGAAGCACCCTCACTCATCCTCAATCCTCCTTTCTCCCTCACAAATTCAGACCGTTTTCGTCTCCGGACATACATTGATATCCTGAACAGACAAGGACAGTCGAGGTCTCAGAGGATGGCCGTTTTCAAATGCGAGGATCTACACTGCCCACCTTGA 2193 0.4496 MAQSTSRARVVGDYIVGPQIGSGSFSVVWHARHRVHGTEVAIKEIVMDRLSKKLQQSLLSEIVILKKINHPNIIRLHDIIEVPGRVHLILEYCRGGDLSMYIQRYGRVPEANAKHFMQQLAAGLQILRENNLIHRDLKPQNLLLSTNDNHSILKIADFGFARSLQPRGLAETLCGSPLYMAPEIMLLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQTQLQQNIMKSNELRFPPDNKDLSSDCIDLCQKLLRRNPVERLTFEEFFNHPFLSPNEPEEPLSRTALRTIDSFPSAKSNLGGHTEESSQDNCLPFLLDDDSGGLDGSTFFSSKKAAMISTYGFSLATKVDKKVEACNISTNMDIAFRYSSVSCKVETTGFKFDHHRPSDGNIKEPIMAVDQTPMKDSSGVVDSLEFIDQDYVIVPAPLVGVTSSSVSASRLHHSPCKSENSSLGSLNRKSTLSAPMPIIGAAISNNCGVGSLESHSSVPSGTSQGSMDVGDALELPSDHCFTRIRLLQECASAITELVTEKIDAGRQLEAFSIQLVILAIWRQALHICHTQAASAIEGSPTQETTLVRGSTNKKHSSLDIQECLIVDTQGPEAVFSQIEREFLLEVGYAEELARALEPIDGSTEMPDAMETIFQSALALGRHGAVDELMGDTESAVSLYSKAVRLLLFLLAEAPSLILNPPFSLTNSDRFRLRTYIDILNRQGQSRSQRMAVFKCEDLHCPP* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01868 730 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01868 730 Gene3D Transferase(Phosphotransferase) domain 1 4 311 - -
Eupl01g01868 730 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01868 730 SUPERFAMILY Protein kinase-like (PK-like) 9 283 IPR011009 -
Eupl01g01868 730 FunFam Serine/threonine-protein kinase ATG1 6 309 - -
Eupl01g01868 730 CDD STKc_ATG1_ULK_like 20 270 - -
Eupl01g01868 730 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01868 730 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 4 644 IPR045269 GO:0004674|GO:0006914
Eupl01g01868 730 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Eupl01g01868 730 FunFam Aurora kinase A 6 96 - -
Eupl01g01868 730 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01868 Eupl-Chr1 40699966 40711683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01868 10 271 CBL-interacting serine-threonine protein kinases AT2G30360 36.194 2.18e-51 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Eupl01g01868 Pkinase 4.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01868 K08269 - nnu:104601127 1050.81