Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01862 ATGGCCGTAGACAACTTTCAGAGAGCAGCTTCAGCGAATCAAAACTCACTACAATCGAACAAGCTTCGATGGGGAGAGCTCGAGGAGGACGACGGGGAGGATCTCGCTTTCCTTCTCCCACCTCGCATGGTCATCGGACCAGACGAGAACGGAGTGAAGAAAGTCATTGAGTACAAGTTCAACGAAGATGGTGAAAAGGTTAAGATCACCACCACTACTCGTACTCGGAAACTCGCCAAAGCTCGACTCAGCAAACGTGCCCTCGAGCGTCGCTCGTGGCCTAAGTTCAGCGATGCTGTACATGAGGACGTCGGTAGCAGACTCACCATGGTTTCGACCGAAGAGATTCTCCTCGAGAGACCTAGGGCTCCTGGTAGCAAAGCAGAAGAAACCAAGGTGGCAGGAGACCCCTTGGCGGAACTCGGAAAAGGGGGAGCTTCTCTCATGGTGTGCAGGACTTGTGGTAAGAAGGGTGACCACTGGACAGCAAAGTGCCCGTACAAGGATCTCGCCCCACAGCCCGAAGGCTTCAATGACAGGCCGGATGCGTCAGAAACACAGACAGGTGCTTCTGGTACCTCCAAGGGAACCTATGTTCCTCCAGGCATGAGAGCAGGGGCAGAGAGAAGCGGACAGGAGATGAGGCGCAGGAACGAAGAGAACTCAGTTCGGGTCACCAACCTCTCGGAGGACACTCGCGAACCTGACTTGCTTGAGCTCTTCCGTACTTTTGGTGCTGTGAGTCGTGTTTATGTAGCTGTTGACCAGAAGACTGGCATGAGCAGAGGCTTTGGTTTTGTCAACTTCGTAAACAAGGAAGATGCTGAGAGGGCTATTAACAAGCTCAATGGGTATGGTTACGACAATCTCATCCTCAGAGTCGAGTGGGCCACACCAAGATCAAACTAG 909 0.5292 MAVDNFQRAASANQNSLQSNKLRWGELEEDDGEDLAFLLPPRMVIGPDENGVKKVIEYKFNEDGEKVKITTTTRTRKLAKARLSKRALERRSWPKFSDAVHEDVGSRLTMVSTEEILLERPRAPGSKAEETKVAGDPLAELGKGGASLMVCRTCGKKGDHWTAKCPYKDLAPQPEGFNDRPDASETQTGASGTSKGTYVPPGMRAGAERSGQEMRRRNEENSVRVTNLSEDTREPDLLELFRTFGAVSRVYVAVDQKTGMSRGFGFVNFVNKEDAERAINKLNGYGYDNLILRVEWATPRSN* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01862 302 MobiDBLite consensus disorder prediction 172 224 - -
Eupl01g01862 302 Gene3D - 173 302 IPR012677 -
Eupl01g01862 302 SMART rrm1_1 222 295 IPR000504 GO:0003723
Eupl01g01862 302 PIRSF Transl_init_eIF-3_RNA-bind 14 302 IPR017334 GO:0003743|GO:0005737|GO:0005852
Eupl01g01862 302 MobiDBLite consensus disorder prediction 180 195 - -
Eupl01g01862 302 CDD RRM_eIF3G_like 222 297 IPR034240 -
Eupl01g01862 302 MobiDBLite consensus disorder prediction 7 22 - -
Eupl01g01862 302 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 223 289 IPR000504 GO:0003723
Eupl01g01862 302 CDD eIF3G 50 169 IPR024675 -
Eupl01g01862 302 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 28 298 - -
Eupl01g01862 302 SUPERFAMILY RNA-binding domain, RBD 219 301 IPR035979 GO:0003676
Eupl01g01862 302 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 221 299 IPR000504 GO:0003723
Eupl01g01862 302 FunFam Eukaryotic translation initiation factor 3 subunit G 186 302 - -
Eupl01g01862 302 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 21 301 IPR017334 GO:0003743|GO:0005737|GO:0005852
Eupl01g01862 302 MobiDBLite consensus disorder prediction 209 224 - -
Eupl01g01862 302 MobiDBLite consensus disorder prediction 1 23 - -
Eupl01g01862 302 Pfam Eukaryotic translation initiation factor 3 subunit G 44 170 IPR024675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01862 Eupl-Chr1 40597195 40602416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01862 18 300 Eukaryotic Initiation Factors Gene Family AT3G11400 66.879 3.70e-150 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01862 K03248 - msin:131243827 508.834