Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01855 ATGGTAGAAATCTGTTGCGGAGTTGTTAATAAGAGCGACACATCGGTGCCTTGCGAACCGAGCTCGCGAGCTGCCAGGCGAAGGAGGATGGAGATTCGACGGTTCAAGTTCATTGAAGGTTTCATGGAACCACCGGAGAATGGAAGGAAGCGACAGAAGCTACAGGTTAATCTAGTGTCGCCGCCGCGTGAGTGTGAGAATGCCGATGAGAACTGTGCCATGGGTGCTCAACATCGTAAAGAAGCAGAGGCTGCAGGATTTGAGATGAATAAGAATTCCAATTCGAATTTGAATGAATCGTCGATTCAGACGATCTCGAATCTGAGCCCGCATCCGCCTCCAGTTGCGATCGATCCGGTAGTTTTAGATCGCTGTCCTAGATTCGGTGTCACTTCGCTATGTGGCCGGAGGAGAGACATGGAGGACGCGGTGGCGATCCATCCGTCGTTTTGCGGACGAGATAGTCGGGATCCAGCGAGTTTACATTTTTTTGGCGTTTACGACGGCCACGGATGCTCTCATGTGGCGATTTCTTGTAAAGATCGGTTGCATCAGCTGGTGAAGGAAGAGCTAGAAAGCGTCGGAGCATCTCTAGAATGGAAGGACGCGATGGAGCGAAGCTTCTCTCGTATGGATAAGGAAGTGCTAGAAAGGAGCAACGGTGTACTGAACGCGAATTGCAAGTGCGAGCTCCAGACGCCGCAGTGCGATGCCGTTGGATCTACCGCCGTTGTTGCGATCGTTACTTCGGATAAGATCGTCGTCGCCAACTGCGGTGATTCGCGTGGCGTACTTTGCCGGCGCGGGAAAGCGGTTCCTCTCTCCACCGATCACAAGCCTGATCGGCCGGACGAACTTCTACGAATCCAAGCCTCCGGCGGCCGTGTAATCTACTGGGACGGCCCTCGTGTCCTAGGAGTTCTAGCCATGTCAAGAGCAATAGGGGACAACTATTTAAAGCCGTACGTAAGTTCGGAACCGGAGGTCACGACAGCAGAGAGAACAGCGGAGGACGAATTTCTGATACTAGCAAGCGACGGATTGTGGGACGTGGTGTCCAACGACATGGCATGTGGTATCGTGCGCATGTGCCTAAGTGGTCAGCTACCGGTTCTCCCGCCGGCAATACCGGGAGATGAAGTCACGGACGCAACCGCCGGAGAGAGCTCCGACAAGGCGTGCTCGGACGCGGCGTTGCTACTTACAAAGCTGGCTCTGGCCCGCCACAGTACGGACAACGTGAGCGTGGTGGTAGTCAATCTCAAGAAGGACACGTAG 1278 0.5415 MVEICCGVVNKSDTSVPCEPSSRAARRRRMEIRRFKFIEGFMEPPENGRKRQKLQVNLVSPPRECENADENCAMGAQHRKEAEAAGFEMNKNSNSNLNESSIQTISNLSPHPPPVAIDPVVLDRCPRFGVTSLCGRRRDMEDAVAIHPSFCGRDSRDPASLHFFGVYDGHGCSHVAISCKDRLHQLVKEELESVGASLEWKDAMERSFSRMDKEVLERSNGVLNANCKCELQTPQCDAVGSTAVVAIVTSDKIVVANCGDSRGVLCRRGKAVPLSTDHKPDRPDELLRIQASGGRVIYWDGPRVLGVLAMSRAIGDNYLKPYVSSEPEVTTAERTAEDEFLILASDGLWDVVSNDMACGIVRMCLSGQLPVLPPAIPGDEVTDATAGESSDKACSDAALLLTKLALARHSTDNVSVVVVNLKKDT* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01855 425 ProSiteProfiles PPM-type phosphatase domain profile. 127 421 IPR001932 -
Eupl01g01855 425 PANTHER PROTEIN PHOSPHATASE 84 421 IPR015655 GO:0004722|GO:0006470
Eupl01g01855 425 CDD PP2Cc 127 421 IPR001932 -
Eupl01g01855 425 ProSitePatterns PPM-type phosphatase domain signature. 163 171 IPR000222 GO:0043169
Eupl01g01855 425 FunFam Protein phosphatase 2C 37 122 425 - -
Eupl01g01855 425 Gene3D - 122 425 IPR036457 -
Eupl01g01855 425 Pfam Protein phosphatase 2C 128 412 IPR001932 -
Eupl01g01855 425 SMART PP2C_SIG_2 142 421 IPR001932 -
Eupl01g01855 425 SMART PP2C_4 117 419 IPR001932 -
Eupl01g01855 425 SUPERFAMILY PP2C-like 125 422 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01855 Eupl-Chr1 40503813 40506493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01855 126 423 PP2C-type Phosphatase Gene Family AT1G07430 63.836 1.44e-143 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01855 K14497 - nnu:104597107 589.726