Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01847 ATGGCTGAACAAGAGATAAGGTTCTGGATTTTATCTGTTATCGGGTTGAGTCTTCTTCTTCAGATTATCTACAACAGCCAAAGAAGAGAGGAAGAACCTAGTGGTCTTGAGGAGTTCTTTCAAGAAGAAGAACTGGCAAACCGGTGGTGGGCTGGAAATGTGTCGATGGGAGGGGTCGACCCGGTTTCATCGGCCCCATCCCTTCACCTTCGAAACACTGACAACGACCATGGGGGACTAGGCCAGCTTGGACCTGGAAGAGAGCACGAGCTCATGAACAACAACAACACCACCAATAGCAGTGGCAGCAACACTAATGGTAACCTGAACGCCACCAACCAGAACCTCGATGACGACGACAGCAGGGAAAATGATCCAGAAAGCGAAGATCAGAACGCCGGCCAAGAGATTGTGGAAGCAGGCAGTGGGCGTAGGCCCCGCGGCCGCCCACCCGGGTCGAAGAATAGGCCGAAGCCCCCTATAATTATTACTCGAGAAAGCCCAAATGCTCTGAGAAGCCACGTATTAGAGATAAGCAGCGGCAGTGACATAGCGGAGAGCGTCGCAACTTTCGCAAGGCGGCGGCAGCGAGGTGTCTGCGTTCTCAGTGGCAGTGGTATTGTAACCAATGTCACTCTCCGTCAACCAACGGCACCGGGAGCAGTCGTCACGCTTCATGGACGGTTCGAGATACTATCGCTGTCAGGTGCGTTCCTCCCTGCACCGTCACCGCCCGGTGCGACCGGACTCACGGTCTACCTAGCGGGCGGGCAGGGGCAGGTGGTGGGTGGGAGCGTGATCGGACCACTCATCGCGTCCGGACCAGTTATTGTGATCGCGGCAACATTCACAAATGCAACATATGAGCGGCTGCCGCTCGAAGACGAACCAACCGGAGAGGGAATGCAATTACCGCAATCGTCAGGGGTAAATACGGTAACGAGTGGTATTTCTGCATCTCAGTCTCATGGTCTAGCTGATCCATCTTCCTTGCCGGTCTACAATTTACCACCAAATCTTCTACCCAACGGTCAGATGCCCCATGACGTGTATTGGGCTCCTCGTCCTCCTCCATCTTATTAA 1083 0.5402 MAEQEIRFWILSVIGLSLLLQIIYNSQRREEEPSGLEEFFQEEELANRWWAGNVSMGGVDPVSSAPSLHLRNTDNDHGGLGQLGPGREHELMNNNNTTNSSGSNTNGNLNATNQNLDDDDSRENDPESEDQNAGQEIVEAGSGRRPRGRPPGSKNRPKPPIIITRESPNALRSHVLEISSGSDIAESVATFARRRQRGVCVLSGSGIVTNVTLRQPTAPGAVVTLHGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVIGPLIASGPVIVIAATFTNATYERLPLEDEPTGEGMQLPQSSGVNTVTSGISASQSHGLADPSSLPVYNLPPNLLPNGQMPHDVYWAPRPPPSY* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01847 360 Pfam Plants and Prokaryotes Conserved (PCC) domain 172 285 IPR005175 -
Eupl01g01847 360 Gene3D - 171 301 - -
Eupl01g01847 360 MobiDBLite consensus disorder prediction 89 115 - -
Eupl01g01847 360 CDD DUF296 172 283 IPR005175 -
Eupl01g01847 360 ProSiteProfiles PPC domain profile profile. 168 306 IPR005175 -
Eupl01g01847 360 MobiDBLite consensus disorder prediction 301 328 - -
Eupl01g01847 360 FunFam AT-hook motif nuclear-localized protein 171 298 - -
Eupl01g01847 360 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 101 354 IPR014476 GO:0003680
Eupl01g01847 360 MobiDBLite consensus disorder prediction 296 329 - -
Eupl01g01847 360 MobiDBLite consensus disorder prediction 65 162 - -
Eupl01g01847 360 SUPERFAMILY AF0104/ALDC/Ptd012-like 168 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01847 Eupl-Chr1 40414931 40416195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01847 45 360 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.242 1.99e-80 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01847 - - nnu:104597337 503.827