Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01841 ATGATGACAGGGCTTGGATCAGCATGTGGAGCATGCAAGTTCTTGAGGAGAAAATGTAACAATGGGTGTGTGTTTGCTCCTTACTTCTGTTATGATCAGGGTGCGACTCATTTCGCTGCAGTTCACAAGGTCTTTGGAGCCAGCAATGCCTCCAAGCTACTATGGCATCTCCCGGTGCACAACCGACGTGAAGCCGCCATCACCATTTCTTATGAAGCTCTGGCTCGGATGGGTGATCCTGTTTATGGTTGTGTTGCTCATATCTTTGCACTTCAACAACAGGTGGCAAACCTAAAAGAAGAGATAGAATTTCTTGAAACTCAAGTAGCAAATCGTGCGATCGATGTTGTTAGCGATCAACGTCCTCATCAAGAAATGAACGACACCGATATGGGGTTTCATCAATTTCCTTCACCAGAAGATGGCTTGAACATATACAACTATTGTAATAATCAACAGGCTCCTGATCCCTCCCATGTGATGAATGCAACTGGCAATCTGGGTCCTTGTAACGAAATAAATTACCTACAGTTTCCTCCTCTGTATAGATGGGGAGATCATACCTTGTTCTTTAACTCTATAAATGAGTCAAGTTCTTCAGAGAGGATCCATATAGGGATGGACCAAGAATTGCCTTCTAATTACCCGTGGTTAGATTTTGTCGCCAACACTGAGAACTGA 681 0.4376 MMTGLGSACGACKFLRRKCNNGCVFAPYFCYDQGATHFAAVHKVFGASNASKLLWHLPVHNRREAAITISYEALARMGDPVYGCVAHIFALQQQVANLKEEIEFLETQVANRAIDVVSDQRPHQEMNDTDMGFHQFPSPEDGLNIYNYCNNQQAPDPSHVMNATGNLGPCNEINYLQFPPLYRWGDHTLFFNSINESSSSERIHIGMDQELPSNYPWLDFVANTEN* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01841 226 PANTHER LOB DOMAIN CONTAINING PROTEIN 2 129 - -
Eupl01g01841 226 Coils Coil 88 115 - -
Eupl01g01841 226 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Eupl01g01841 226 ProSiteProfiles LOB domain profile. 7 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01841 Eupl-Chr1 40370374 40372417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01841 9 168 AS2 family AT3G58190 57.407 5.44e-59 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl01g01841 LOB 2.1e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01841 K13945 - nnu:104601099 240.736