Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01833 ATGAATATGCATGGAATCTCTCTCCCTCTAACAACAAAACTCCTCTCTTTCTTTTCTCCATCTCTTCTTCCTCATCGTTCCCTTCTCTACCTGCCAAGTCAATCAAACCCCTCGACTTCCGTTTGCAGATATGGCCATGGAAGTCTCTTCAAGTTTATTGGATATGCTCCTCATTCTTATTCCTCAAGTTTTAAGGGAAAGAAGAGAAGCAGTAATAATCTTTTGAGAGCGACCCGTAGAGAATCTCCATACGAAGTCTTGGGTGTCTCGCCCTCTGCAAGACCTGAAGAAATCAAGAGAGCTTATAGGAAGCTCGCTCTCAAATTCCACCCTGATGTCAACAAAGAGGCAAATGCCCAGGAGAAATTCATGCGGATAAAGCATGCATACAATATGCTGTTGAACTCAGAATCTCGGCGCAAATATGATTTTGGAAGTCGCACATCTGATTATTCCAATTCTACAGCTGAAACAAACCAAAGCAGGAATGCCCAAGATGAGGAAGAGTTTTATGGATTTGGTAATTTTTTGAGGGATATTCAAATAACAATAGAGGACTTCTTTAGAGACCTCCAAGCAGAATTTCAGAACTGGGAAGCGAGTGCTGGTTCACAAGGGAAGCCAAAGAGTTTGTGGGAGGAATTGGCGGACATTGGTGAAGAATTTGTGGAGTTTCTAGAGAAAGAGCTCAACATCACTGATCCAGATGTCGAAGCAAAAAACAGTGATGAAGGGCCTCCAAAGGGCAACCCGTATGAACATTCAGGGTCAGATAGTAAGGGAGCTGGTGTTCAAACCGATGCTGGAAAGGAGGTCAGCATTGAAGATAACATTGATGAGATTGAAGCCACTCTTGCTCAGTTGAAAAGGGAATTGGGGCTCTAG 885 0.4328 MNMHGISLPLTTKLLSFFSPSLLPHRSLLYLPSQSNPSTSVCRYGHGSLFKFIGYAPHSYSSSFKGKKRSSNNLLRATRRESPYEVLGVSPSARPEEIKRAYRKLALKFHPDVNKEANAQEKFMRIKHAYNMLLNSESRRKYDFGSRTSDYSNSTAETNQSRNAQDEEEFYGFGNFLRDIQITIEDFFRDLQAEFQNWEASAGSQGKPKSLWEELADIGEEFVEFLEKELNITDPDVEAKNSDEGPPKGNPYEHSGSDSKGAGVQTDAGKEVSIEDNIDEIEATLAQLKRELGL* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01833 294 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Eupl01g01833 294 CDD DnaJ 83 135 IPR001623 -
Eupl01g01833 294 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Eupl01g01833 294 Coils Coil 271 291 - -
Eupl01g01833 294 PRINTS DnaJ domain signature 102 117 IPR001623 -
Eupl01g01833 294 PRINTS DnaJ domain signature 118 138 IPR001623 -
Eupl01g01833 294 PRINTS DnaJ domain signature 84 102 IPR001623 -
Eupl01g01833 294 SMART dnaj_3 81 138 IPR001623 -
Eupl01g01833 294 SUPERFAMILY Chaperone J-domain 37 142 IPR036869 -
Eupl01g01833 294 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 53 228 - -
Eupl01g01833 294 MobiDBLite consensus disorder prediction 145 166 - -
Eupl01g01833 294 Gene3D DnaJ domain 79 203 IPR036869 -
Eupl01g01833 294 Pfam DnaJ domain 83 143 IPR001623 -
Eupl01g01833 294 MobiDBLite consensus disorder prediction 233 277 - -
Eupl01g01833 294 MobiDBLite consensus disorder prediction 147 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01833 Eupl-Chr1 40222153 40228575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01833 84 143 C2H2 Transcription Factor Family AT1G74250 42.424 2.52e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01833 - - msin:131243780 370.548