Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01830 ATGGGGGAAGAAGTGCAGATGAGCGATTACGAAGGCAGTGTTTGCGCTGGAGACGAAGAACGGGTGCTCGAATGGGAGGTCGGGTTGCCGAACGCAGACGATATTACGCCTTTGTCTCAGCATCTGATCCCACCAGGCCTCGCGTCGGCTTTCAGTATAACCCCCGAGCCATGTCGAAGCATGATCGATGTGAATCGTGCGTCGCAGAGCACATTATCGAATCTCCGTCGAGAGAATCAGGGCTTCTCCTCTAATAATCTCAAGTCCTTCCCTTCTTTTGCCGAGGATCGAAGCCCGGATCCGTTTGTTGTCGAAAGCGACGAACATGAACCCGTGAGTCCTACGAAAGATGGGTTCGAAACGCGCAAACTACGGAGAATGGAGAACGCGGAAGAGGTTGATTCGGCTTTGCGGACAGAGAATTCTGGTGATGATCAGTCTGCCCGGAACTTGAAACGGCCCCGATTAGTGTGGACCCCGCAGCTTCACAAGCGGTTTGTGGATGTCGTCACGCATCTGGGTATTAAGAACGCTGTACCAAAGACGATCATGCAACTGATGAACGTGGAGGGTCTGACACGAGAGAACGTTGCGAGCCATCTCCAGAAGTATCGGCTCTACCTGAAAAGGATGCAAGGCTTGTCCAACGACGAGGGCCCATCCTCTCCCGATCACCTCTTTGCATCAACCCCTGTTCCACAGAGCCTACACGAGTCTGGTGGGAATGGGCATACGCAAGTTCCAATGCCATATGGGGCGCCCTTGCTGCCTATGCCGGTTCTTGGTATGGCTCATGGTCACGGTCATATGGGGATGGCTGTTGGTAATCCAGCCTCTGCTGCCTTTCATGGGTTCGACTCGAATCACTATAACATGTATAGGGAGCAGCATAGAGATTGGTCCAGTAGTAAGTTTGGTTCGATTGTGCCGTACCCTTATGTTACTCCTAATGATAAATAA 960 0.5208 MGEEVQMSDYEGSVCAGDEERVLEWEVGLPNADDITPLSQHLIPPGLASAFSITPEPCRSMIDVNRASQSTLSNLRRENQGFSSNNLKSFPSFAEDRSPDPFVVESDEHEPVSPTKDGFETRKLRRMENAEEVDSALRTENSGDDQSARNLKRPRLVWTPQLHKRFVDVVTHLGIKNAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNDEGPSSPDHLFASTPVPQSLHESGGNGHTQVPMPYGAPLLPMPVLGMAHGHGHMGMAVGNPASAAFHGFDSNHYNMYREQHRDWSSSKFGSIVPYPYVTPNDK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01830 319 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 8 291 IPR044841 GO:0003700|GO:0006355
Eupl01g01830 319 MobiDBLite consensus disorder prediction 215 249 - -
Eupl01g01830 319 MobiDBLite consensus disorder prediction 78 149 - -
Eupl01g01830 319 FunFam Two-component response regulator 149 212 - -
Eupl01g01830 319 NCBIfam myb-like DNA-binding domain, SHAQKYF class 154 206 IPR006447 GO:0003677
Eupl01g01830 319 MobiDBLite consensus disorder prediction 215 242 - -
Eupl01g01830 319 MobiDBLite consensus disorder prediction 100 149 - -
Eupl01g01830 319 Gene3D - 150 212 - -
Eupl01g01830 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 158 209 IPR017930 -
Eupl01g01830 319 Pfam Myb-like DNA-binding domain 157 205 IPR001005 -
Eupl01g01830 319 SUPERFAMILY Homeodomain-like 151 210 IPR009057 -
Eupl01g01830 319 MobiDBLite consensus disorder prediction 78 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01830 Eupl-Chr1 40194632 40200084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01830 1 298 G2-like Transcription Factor Family AT3G46640 52.716 1.22e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Eupl01g01830 Myb_DNA-binding 5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01830 - - nnu:104597142 449.899