Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01819 ATGAGTTTTGTTTTCCGTGGGACTAGAGCAGATATAGAAAGCGGATTTCCAGGATTTATTCCTGAACAACGTGCAATGCGTGTTCATGCAGCTCGGCCAGTTAATACCAACTCAATGGTTTTTCTTGTTACAGTTCTTTTGCTGTTCATGATACTAAATTCTCATCAGATGTCACCAAACTTTCTGCTCTGGCTATTTGTCGGTGTATTTTTAATAGCCACAAGACTTAGGATGTATGCCACTTGTCAACAACTTCAAGCTCAGGCCCAAGCTCACGCTGTGGCAGCCAGTGGCCTGCTTGGTCATACGCAGTTGCGGTTGCATATGCCACCATCCATAGCCTTTGCAACTAGAGGGCGATTACAAGGCCTCAGACTCCAGCTTGCACTTCTTGACCGGGAATTTGATGAACTAGATTATGAAACTTTGAGAGCGCTGGATTCTGATAATGCTTCCACTGCTCCTTCGATGAGTGAGGAAGAGATAAATGCCCTTCCTGTTCACAAATACAAGGTCACTGGCCCACAGAGTGATGGCTCATCGCTCCAACAGGCCTCATCTACTTCAGCCACAGCTGAGAAAAAGCAAGACTCTGCCAAACCAGATGGAAGTACAAAGGCCCCAGAAGATGAACTGACATGCAGTGTTTGCTTGGAGCAAGTCAATGTGGGAGAACTCATACGGAGCTTGCCATGCTTGCATCAGTTCCATGCTAACTGCATTGACCCATGGCTGCGGCAGCAGGGGACATGCCCTGTGTGTAAATTTAGAGCGGGATCAGATTGGCAGGAAAACGGGGCAAATGGAATGGATGGGTCTTATATGGTTTGA 831 0.4693 MSFVFRGTRADIESGFPGFIPEQRAMRVHAARPVNTNSMVFLVTVLLLFMILNSHQMSPNFLLWLFVGVFLIATRLRMYATCQQLQAQAQAHAVAASGLLGHTQLRLHMPPSIAFATRGRLQGLRLQLALLDREFDELDYETLRALDSDNASTAPSMSEEEINALPVHKYKVTGPQSDGSSLQQASSTSATAEKKQDSAKPDGSTKAPEDELTCSVCLEQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSDWQENGANGMDGSYMV* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01819 276 MobiDBLite consensus disorder prediction 174 194 - -
Eupl01g01819 276 CDD RING-H2_PA-TM-RING 213 255 - -
Eupl01g01819 276 SUPERFAMILY RING/U-box 209 259 - -
Eupl01g01819 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 260 IPR013083 -
Eupl01g01819 276 Pfam Ring finger domain 213 255 IPR001841 -
Eupl01g01819 276 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Eupl01g01819 276 MobiDBLite consensus disorder prediction 173 209 - -
Eupl01g01819 276 PANTHER TARGET OF ERK KINASE MPK-1 1 261 - -
Eupl01g01819 276 SMART ring_2 214 254 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01819 Eupl-Chr1 40081959 40094289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01819 1 276 C3H Transcription Factor Family AT3G55530 76.895 7.03e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01819 K16283 - nnu:104597150 443.351