Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01812 ATGCAAACCTTCTCACTTTTCTCTGCAACTTTTCTTTCTCTGGTTCTTCTCATATCTGTTCTTCTCTTCTTGTTATCTTTGTTGTTTCAATGGAGTCACCCCAAAGACAAACGTCTACCCCCTGGTTCTTTGGGTTGGCCTTATGTAGGGGAGACACTCAAGCTCTACACTCAAAACCCAAATACCTTCTTCTCCAAGAGGCAAAAACGGTACGGGGATGTATTTAAGACGCATATATTGGGATGTCCTTGTGTGATGATTTCAAGCCCGGAAGCAGCGAAGATTGTGCTAGTGAGTCGAGCTCATTTGTTCAAGCCAACATATCCACCTAGTAAAGAGAAGATGATAGGACCTGAGGCTCTATTCTTCCATCAAGGGGATTATCATTCTAGGCTAAAGAAGTTGGTTCAAGCCTCCTTCCTTCCTTCCGCGTTAAGAGGATTCGTTACCGAGATTGAGCAACTTGTTCTACAATATCTGCCTTCTTGGGAAAGCAGCACCATTAACACTCTAAAAGAGATGAAGAGGTTTGCTTTCGATGTGGCAATGCTTTCGGCATTTGGCGGCGGTTCGGACTTAGAGACAGATGGCATCGAGCATTTGTATCATTGCTTGGAGAAAGGCTACAATTCCATGCCTTTCAACCTACCCGGAACTCCCTTTAGAAAAGCAATGAAGGCAAGAAGGCTTCTCAATGAGACTTTGAAGAGAGTGATAGAGAAGAGAAGGGAAAGTGAGAAGCAAGGTGGGGGCTTGTTGGGAGTATTACTTGGGTCTAAAGATCGGGAATTGAATCATCTTAGCGAGTCTCAAGTTGCTGATAATATCATTGGAGTGATTTTTGCTGCTCACGACACCACAGCGAGCGTTCTCACTTGGATTCTAAAATATTTGCACGACAACGAAGAACTCCTGGATTCGGTTACGAGGGAACAAGAAAGCATTAGACAAGGAATAAAAGAAGAAAATCGTGGGCTGACATGGGATGATACGAGAAGGATGCCATTGACTAGCCGGGTAATTCAAGAGACTCTAAGAACAGCAAGTATTCTGTCATTCACGTTCAGAGAAACCGTGGAGGACGTAGAGTTTCAAGGATACTTAATCCCGAAAGGATGGAAGGTTCTTCCCCTCTTCAGAAGCATTCATCACTGTGCAGATTTCTTCCCTCAACCTGAAAAATTCGACCCAGCAAGATTCGAGGTGCCACCGAGACCCAACACGTACATGCCGTTTGGGAACGGGTTGCACTCGTGTCCCGGTAGTGAGCTGGCCAAGCTCGAGATGCTCGTTCTCCTCCACCACCTCACCACGACTTACAGGTGGGAGGTTGTAGATGAGGAGGAAGGGATACAATACGGTCCTTTCCCTGTACCCAAACGAGGATTACCTATAAGGGTAACCACAAGGAACAAGAAGACGATCTGA 1428 0.4559 MQTFSLFSATFLSLVLLISVLLFLLSLLFQWSHPKDKRLPPGSLGWPYVGETLKLYTQNPNTFFSKRQKRYGDVFKTHILGCPCVMISSPEAAKIVLVSRAHLFKPTYPPSKEKMIGPEALFFHQGDYHSRLKKLVQASFLPSALRGFVTEIEQLVLQYLPSWESSTINTLKEMKRFAFDVAMLSAFGGGSDLETDGIEHLYHCLEKGYNSMPFNLPGTPFRKAMKARRLLNETLKRVIEKRRESEKQGGGLLGVLLGSKDRELNHLSESQVADNIIGVIFAAHDTTASVLTWILKYLHDNEELLDSVTREQESIRQGIKEENRGLTWDDTRRMPLTSRVIQETLRTASILSFTFRETVEDVEFQGYLIPKGWKVLPLFRSIHHCADFFPQPEKFDPARFEVPPRPNTYMPFGNGLHSCPGSELAKLEMLVLLHHLTTTYRWEVVDEEEGIQYGPFPVPKRGLPIRVTTRNKKTI* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01812 475 PRINTS P450 superfamily signature 419 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS P450 superfamily signature 410 419 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 SUPERFAMILY Cytochrome P450 34 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 412 421 IPR017972 GO:0005506|GO:0016705
Eupl01g01812 475 Gene3D Cytochrome P450 30 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 Coils Coil 228 248 - -
Eupl01g01812 475 PRINTS E-class P450 group I signature 409 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 419 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 291 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 PRINTS E-class P450 group I signature 378 402 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 Pfam Cytochrome P450 40 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Eupl01g01812 475 FunFam Abscisic acid 8 29 469 - -
Eupl01g01812 475 CDD CYP90-like 67 468 - -
Eupl01g01812 475 PANTHER CYTOCHROME P450 26 37 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01812 Eupl-Chr1 39973120 39978655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01812 8 465 Cytochrome P450 AT4G19230 58.913 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01812 K09843 - pop:7468629 783.867