Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01811 ATGGAGGAATTAAACGCGATTTGGTCAGACGGGTCGGAAGAGGAGCTGGTGAGAGAACTTCTTGACAATGAATCCCCTTTCTTTGTATTACCCAACATCACTGAACCCGAACCAAGCCCTGCTTCGTCAGCGCCTGTAACAGACTGTCTTCTCCCCAAAGTTTACTCCGGACCAACAATCGAAGACATCGAATGTGCACTCTCCATAACAAACCGAACCACTGAATCCAACGACCCGAGTAATATTTCACGAACCGGAATTTCACTACTAGGTAAGGGATTGAGTAAGAGCGACCATAAGTATACTCTGAAAATCAAGGGCCATGGGGATAGAATGCCAAATGACGGTTATAAATGGAGGAAATATGGGCGGAAATCTATCAAGAACAACCCGAATCCGAGGAGTTATTATAGGTGCACAAATCCAAGGTGCAGCGCAAAGAAGCAGGTGGAGCGGTCAAACGAGGACCCGGATACTCTCGTCATCGCCTACGAAGGGCTCCACCTCCACTTCGCTTACTCACACTTCCTCCTAACCCCACCCATCAAAAAGTCCAAGACGACAACTGCACAAGCCCACCAAGCTGGACAGATCCAAGAAAATGTAGAAGCCCAAGTACGGGAAGAAAGTCCATCTCCGGTGGGTCCTACCTCACGGAACCCAGTTGTGATTGGTCCTCAACATGAATTGTATGAAGGAATGGGCCCCCAAGGATTGCTTGAAGATGTGGTACCTATGGTGATTCGGAACCCTTGGATCAACAACACTTTATCAAACTCATCTTGCTCATGTTCTTACCCATCATCTCCTCCTACTTCTTCCTCTTCTTCCCTCTCTTGCTCTCCTACTTATTCTTCTTTTGATTTTGCTAATATTACTAGTTTTATGTGA 891 0.4658 MEELNAIWSDGSEEELVRELLDNESPFFVLPNITEPEPSPASSAPVTDCLLPKVYSGPTIEDIECALSITNRTTESNDPSNISRTGISLLGKGLSKSDHKYTLKIKGHGDRMPNDGYKWRKYGRKSIKNNPNPRSYYRCTNPRCSAKKQVERSNEDPDTLVIAYEGLHLHFAYSHFLLTPPIKKSKTTTAQAHQAGQIQENVEAQVREESPSPVGPTSRNPVVIGPQHELYEGMGPQGLLEDVVPMVIRNPWINNTLSNSSCSCSYPSSPPTSSSSSLSCSPTYSSFDFANITSFM* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01811 296 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01811 296 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01811 296 Gene3D WRKY domain 103 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01811 296 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 193 IPR044810 GO:0003700
Eupl01g01811 296 SUPERFAMILY WRKY DNA-binding domain 111 170 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g01811 296 MobiDBLite consensus disorder prediction 203 217 - -
Eupl01g01811 296 Pfam WRKY DNA -binding domain 114 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g01811 296 MobiDBLite consensus disorder prediction 203 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01811 Eupl-Chr1 39954936 39959686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01811 1 250 WRKY Transcription Factor Family AT5G43290 39.781 1.54e-43 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl01g01811 WRKY 2.7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01811 - - nnu:104601055 293.123