Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01788 ATGAAGTGCTTTCATTTCTCTAATGGAGAGAAGAGAGAAGATGACGATCCCTCCATTTCTAAGGTTTCTAAGGTTTCGTGGGCTCGTTCTCTTAGTGTAGCTTCTAGTAGTCTAGATATTCGGCGGTCCGAGTTCGATTCCGATTATTCGAGGGATCTGTCGGACTCGGTGGGATTTCATGACTTCTTGTCTCAAAGGAGGTCTAATGACCTACGTGTGTTTGCGTTCTCTGAGTTGAGATCGGCGACGAGGGGGTTTAGTCGGGGGTTGATGATTGGAGAGGGAGGGTTTGGGTGTGTTTATAGAGGGGTTGTTAGGGTTTCTGATGACTATCCTGATGCCAAGATGGATGTTGCTGTGAAGCAATTGAATCGGAATGGATTGCAGGGGCACAAGGAATGGATTACAGAAGTGAATTTTTTGGGTGTAGTCAAGCATCCAAATCTTGTCAAATTAGTGGGATATTGTGCTGAAGATGATGAGCGGGGTATTCAACGGCTTTTGGTATATGAACTTATGCCCAATAAAAGCTTGGAGGATCATCTACTTGCTCGGATGCCATCACCTCTCTCATGGGAAATGAGATTAAGAATTGCCCGAGATGCTGCCCGTGGTTTAGCATACCTTCATGAAGAAATGGATTTTCAGTTAATATTTCGGGATTTTAAAACGTCAAATATTCTGTTGGATGAGGACTTCAATGCAAAGCTCTCAGACTTTGGATTGGCGAGGCAGGGTCCATCTGAAGGACTTGGTCATGTTTCAACATCAGTTGTGGGTACAGTTGGCTATGCAGCACCAGAGTACGTTCAAACAGGCAGGCTGACTACTAAGAGTGATGTTTGGAGCTTTGGGGTGGTTCTCTACGAGCTCGTCACTGGAAGACGATCAGTGGACAGAAACCTTCCGAGAAGCGAGCAGAAGCTCCTGGAATGGGTGAAACCCTATGTATCAGATTCCAAGAAATTCCACCTGATTATGGATCCACGGCTTGAAGGACAGTATTGCATAAAATCGGCTCAGAAGCTTGCCTCCCTGGCTAACAAGTGTCTGATGAAGCAATCGAAGTCCCGACCTAAGATGAGCGAGGTGGTTGAGATTCTGGGACAGATTATCGGTGAGATATCATCAACAGATGGCAGGGTCTCACATCCTGTCAACGAAGCTGAAGCTGTGAAGGAAGATAGTGTGGCAGAGACTGAATCAAAGCAAGGGAACAATTATCTGAGGAGGGTCTTTGATTTCAGAGAGATGGTCAGTTTAAGGAACAGATCTGTTGGGAAGTTAGATTGGAGAAATTGGACGCCAGTAGTGAGAACATGGTGA 1326 0.4563 MKCFHFSNGEKREDDDPSISKVSKVSWARSLSVASSSLDIRRSEFDSDYSRDLSDSVGFHDFLSQRRSNDLRVFAFSELRSATRGFSRGLMIGEGGFGCVYRGVVRVSDDYPDAKMDVAVKQLNRNGLQGHKEWITEVNFLGVVKHPNLVKLVGYCAEDDERGIQRLLVYELMPNKSLEDHLLARMPSPLSWEMRLRIARDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPSEGLGHVSTSVVGTVGYAAPEYVQTGRLTTKSDVWSFGVVLYELVTGRRSVDRNLPRSEQKLLEWVKPYVSDSKKFHLIMDPRLEGQYCIKSAQKLASLANKCLMKQSKSRPKMSEVVEILGQIIGEISSTDGRVSHPVNEAEAVKEDSVAETESKQGNNYLRRVFDFREMVSLRNRSVGKLDWRNWTPVVRTW* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01788 441 Gene3D Transferase(Phosphotransferase) domain 1 173 389 - -
Eupl01g01788 441 Gene3D Phosphorylase Kinase; domain 1 66 172 - -
Eupl01g01788 441 ProSitePatterns Protein kinases ATP-binding region signature. 92 121 IPR017441 GO:0005524
Eupl01g01788 441 FunFam Serine/threonine-protein kinase BIK1 57 172 - -
Eupl01g01788 441 ProSiteProfiles Protein kinase domain profile. 86 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g01788 441 PANTHER OS01G0588500 PROTEIN-RELATED 44 371 - -
Eupl01g01788 441 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 173 380 - -
Eupl01g01788 441 SUPERFAMILY Protein kinase-like (PK-like) 67 368 IPR011009 -
Eupl01g01788 441 Pfam Protein tyrosine and serine/threonine kinase 91 368 IPR001245 GO:0004672|GO:0006468
Eupl01g01788 441 CDD STKc_IRAK 92 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01788 Eupl-Chr1 39645434 39653542 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01788 72 401 Glycoside Hydrolase AT3G07070 49.408 2.41e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl01g01788 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01788 - - nnu:104602452 729.169