Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01781 ATGAAGGACAGGCAGCGCTGGAGAGCTGAAGAGGACGCCCTGTTACGTGCTTATGTGAAGCAATATGGCCCAAGGGAGTGGAATCTTGTGTCCCAACGCATGAACACACCTCTGCACAGGGACGCCAAATCCTGCTTAGAAAGGTGGAAGAACTACCTCAAGCCCGGAATCAAGAAGGGATCCCTCACCGAGGAAGAACAGTGTCTGGTAATTCATCTTCAGGCCAAGCACGGCAACAAGTGGAAGAAGATTGCAGCTGAGGTCCCCGGCCGCACTGCAAAGAGGCTAGGCAAGTGGTGGGAAGTGTTCAAGGAGAAGCAGCAGAGGGAGCAGGAGAACAACAAGGCCCTTGACCCAATCGAGGAGGGCAAGTATGACCGCATCCTTGAGACATTTGCTGAGAAACTAGTGAAAGAGCATCCAACCCCTCCATTCCTCATGGCCACTTCCAATGGTGTCTTTCGTCACTCCAATTCCCCCGCGCTTCCTCCATCAACTTTGCTTCCTCCATGGCTGTCCAGTTCCAATGTCACAGCTACTGTAAGGTCGTCATCTCCTTCTGTGGCACTAACTCTCTCACCCTCAACAGTTAGCCCAGCTCCTTCCATCCCATGGCTGCAGCCTGAAAGTGGAGGAACTGATAATCCCCTTGTGTTGGGCAGTTTGCCACCACATGGGGCAGTGCCTACTAGTGGAGACAACCTGATGGTTTCCGAGCTTGTGAGGTGTTGCAGAGAGTTGGAGGGGGGACACCAAGCTTGGGCAGCACATAAGAAAGAAGCAGCCTGGAGGCTTAAGAGGGTAGAACTACAGCTGGAGTCTGAGAAAATGTGCCGGACGAGGGAGACAATGGAGGAAATTGAATCAAAGGTGAGGTCCCTCAGGGAAGAACAGGAGGCAATGCTGGAGAGGATTGATGCAGAATACAGGGAACAGTTAGTGGGTTTGAGGAGGGATGCTGAAGCCAAGGAGCAGAAGCTGGCAGAGCAATGGGCTGCAAAGCACGTGCGCCTATCCAAGTTTCTTGAGAGAATGGGGTGCCTGCCTAGGCCTGCTGACTCCAATGGTATGTGA 1074 0.5298 MKDRQRWRAEEDALLRAYVKQYGPREWNLVSQRMNTPLHRDAKSCLERWKNYLKPGIKKGSLTEEEQCLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQENNKALDPIEEGKYDRILETFAEKLVKEHPTPPFLMATSNGVFRHSNSPALPPSTLLPPWLSSSNVTATVRSSSPSVALTLSPSTVSPAPSIPWLQPESGGTDNPLVLGSLPPHGAVPTSGDNLMVSELVRCCRELEGGHQAWAAHKKEAAWRLKRVELQLESEKMCRTRETMEEIESKVRSLREEQEAMLERIDAEYREQLVGLRRDAEAKEQKLAEQWAAKHVRLSKFLERMGCLPRPADSNGM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01781 357 Gene3D - 62 120 - -
Eupl01g01781 357 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Eupl01g01781 357 PANTHER PROTEIN ROUGH SHEATH 2 HOMOLOG 1 351 - -
Eupl01g01781 357 SUPERFAMILY Homeodomain-like 4 98 IPR009057 -
Eupl01g01781 357 CDD SANT 6 53 IPR001005 -
Eupl01g01781 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 57 IPR017930 -
Eupl01g01781 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Eupl01g01781 357 Gene3D - 4 58 - -
Eupl01g01781 357 Coils Coil 284 326 - -
Eupl01g01781 357 SMART sant 58 106 IPR001005 -
Eupl01g01781 357 SMART sant 3 55 IPR001005 -
Eupl01g01781 357 CDD SANT 63 104 IPR001005 -
Eupl01g01781 357 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Eupl01g01781 357 FunFam MYB-related transcription factor 4 58 - -
Eupl01g01781 357 Pfam Myb-like DNA-binding domain 7 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01781 Eupl-Chr1 39555712 39558582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01781 1 351 MYB Transcription Factor Family AT2G37630 67.209 7.58e-162 456
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl01g01781 Myb_DNA-bind_6 6.4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01781 K09422 - vvi:100256209 589.726