Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01769 ATGGGTAACGGTTTGGGTAAGCTCGGCATCTGCTTCTCAGGAGGTAGCCAGCGACACGATATAGCCGTTGTGATATCGGAGCCGCTCGATGAAGGGTTGGGTCACTCGTTCTGTTACGTTCGACCTGATCCATGTCGGTTGTCGTTGTCGAAGGTCCATTCGGAGGAGACCACAACGTTCCGATCAATCTCCGGTGCCTCTGTAAGTGCTAATACATCCACCCCTTTATCTACTGCGTTTGTTGATCTATATTCGTACAATAGTCTTGATCGAGCTGCTGCTTTTGAGAGTTCTACCTCTTTTGCTTCGATTCCCTTACAACCAGTCCCAAGGTGTTTCGTGAATTCGGGTCCTTTGTCAGGGAGTTTGGGGGGAATTATGGGTTCGGGACCGCTTGAAAGGGGATTTTTATCGGGCCCGATTGAACGAGGGTTTATGTCCGGACCGCTGGATCGTGGGTTGTTTTCGGGTCCTCTTGAAAAGGGTTCTGATGAGTTCCAGAGGAGTTTTTCTCATGGGGGTTTTGCGTTGAGACCGAGATCCAAAAAAGAGTCTTTGATTCGGGTTCTTCGGAGAGCGATTGCAAAGACGATCTCTCGGGGGCAGAATTCGATTGTCACTCCAATTAAGGGGGTTGTATCGGTTAAGGAATCCGATTGGATTGTTGGGTCGGAGAAGAACGGAGAGAATCTTACTGTGAGTAGTACTAATTTGAGCAGCGAATTGAGCTTGAGCTTGGATGATGAAGATTCTTTGGAAAGTCAAAATCTTCAATGGGCCCAAGGGAAGGCCGGGGAGGATCGAGTTCATGTTGTAATTTCGGAAGAACATGGGTGGGTTTTTGTTGGAATTTATGATGGATTTAATGGTCCTGATGCTCCCGATTATCTCCTCTCAAATTTGTACCCTGCTGTTCATAAGGAACTCAAGGGATTGTTATGGGAAGACAAGTACGACCCTGCAACCGCCACCACCACTGACCTGAATCTGGCCGTTGATTCTAACTCAGAGGAGGTTTCATTTCAGACCGATGAATCCAATCACTCTAGCATGAGGAATCAGGCAGTCGAAAGTTGTTCTCAGTGTTTCGTTTCCGAGAATTATCCATTAGGAGATGAGGATCACAATTCAAAGAGAAGCCGGGGTAAGAACTCAAAGAACAGATTCAAAGGGGCAGCAAAAAAATGGGAGGAGAATCATAAAAGGTGGAAGTGCGAATGGGACAGAGAGAGATTGGAGCTCGATCGGAGGCTGAAGGAACAGTTAAACCGATCTGGTTCAGAAGGGGCAGCAGCTATTAACCACTCTGATGTCTTGAAAGCTCTTTCTCAGGCCTTGAAAAAGACAGAGGAGGCCTATCTGGAGATTGCAGATAAGATGGTCATGGAAAATCCAGAGTTGGCTCTGATGGGTTCGTGTGTTCTGGTTATGCTGATGAAGGGAGAGGATGTTTACTTGATGAACGTCGGTGATAGTCGTGCAGTCTTAGCTCAGAAAGCAGAGCCTGACCTTTGGCTTGGAAAGGCCCGGCAGGACTTGGAACGGATCAAGGAAGAAACTTTGCATGATCTTGAAGCGTTTGATGGCGATCAGTTCGATGGACTACCCGACTTAAGTGCTCTTCAGCTCACCTTGGACCATAGCACTTGCATGGAGGAGGAAGTTCGGAGAATCAAGAATGAACATCCAGATGATGCTTCTGCCGTCATGAACGACCGTGTGAAAGGTTCGTTGAAGGTCACAAGAGCTTTCGGTGCTGGCTTTCTCAAACAGCCCAAGTGGAACGATGCACTTCTCGAGATGTTCAGAATCGACTATGTAGGGACATCCCCATACATCACCTGTTTCCCATCTCTCTATCACCACAGATTGGGACCCAAGGACAGATTTTTGATATTGTCGTCCGATGGGCTCTATCAATACTTCACCAATGAAGAGGCGGTCTCCCAGGTTGAGCTGTTCATTGCTTCCTCACCTGAAGGAGATCCCGCACAACACCTTGTTGAAGAAGTCCTGTTTCGTGCAGCAAAGAAAGCTGGTATGGACTTTCATGAGTTGCTTGAAATACCACAAGGGGACCGCCGCCGGTACCATGATGATGTTTCCATCATTGTTATCTCTTTAGAGGGAAGAATATGGAGATCATGTGTGTAA 2154 0.474 MGNGLGKLGICFSGGSQRHDIAVVISEPLDEGLGHSFCYVRPDPCRLSLSKVHSEETTTFRSISGASVSANTSTPLSTAFVDLYSYNSLDRAAAFESSTSFASIPLQPVPRCFVNSGPLSGSLGGIMGSGPLERGFLSGPIERGFMSGPLDRGLFSGPLEKGSDEFQRSFSHGGFALRPRSKKESLIRVLRRAIAKTISRGQNSIVTPIKGVVSVKESDWIVGSEKNGENLTVSSTNLSSELSLSLDDEDSLESQNLQWAQGKAGEDRVHVVISEEHGWVFVGIYDGFNGPDAPDYLLSNLYPAVHKELKGLLWEDKYDPATATTTDLNLAVDSNSEEVSFQTDESNHSSMRNQAVESCSQCFVSENYPLGDEDHNSKRSRGKNSKNRFKGAAKKWEENHKRWKCEWDRERLELDRRLKEQLNRSGSEGAAAINHSDVLKALSQALKKTEEAYLEIADKMVMENPELALMGSCVLVMLMKGEDVYLMNVGDSRAVLAQKAEPDLWLGKARQDLERIKEETLHDLEAFDGDQFDGLPDLSALQLTLDHSTCMEEEVRRIKNEHPDDASAVMNDRVKGSLKVTRAFGAGFLKQPKWNDALLEMFRIDYVGTSPYITCFPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSQVELFIASSPEGDPAQHLVEEVLFRAAKKAGMDFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01769 717 Coils Coil 439 459 - -
Eupl01g01769 717 PANTHER PROTEIN PHOSPHATASE 2C 249 706 IPR015655 GO:0004722|GO:0006470
Eupl01g01769 717 CDD PP2Cc 414 708 IPR001932 -
Eupl01g01769 717 Pfam Protein phosphatase 2C 423 673 IPR001932 -
Eupl01g01769 717 MobiDBLite consensus disorder prediction 370 391 - -
Eupl01g01769 717 SUPERFAMILY PP2C-like 263 709 IPR036457 -
Eupl01g01769 717 ProSiteProfiles PPM-type phosphatase domain profile. 249 708 IPR001932 -
Eupl01g01769 717 SMART PP2C_4 250 706 IPR001932 -
Eupl01g01769 717 Gene3D - 229 713 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01769 Eupl-Chr1 39390301 39393976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01769 1 717 PP2C-type Phosphatase Gene Family AT1G07630 67.120 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01769 - - nnu:104593809 1109.36