Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01758 ATGTGCCAGAAGCAATGCCGGGATGAGAACGGATTCAAGTGCCATTGCATGAGTGAGAGCCACCAGCGCCAAATGGAAGTCTTTGGCCAAAACCCTAACCGCATCGTCGATGGGTACTCTGAGGAGTTTGAGCTGTCTTTCCTCGAGCACGTGAAGCGGAACCACCACTTCAGCCGGGTTGCCGCCACCGTTGTCTATAACGAGTACATCGCTGACCGCCACCAAATCCACATGAACTCCACAGAGTGGGCAACCCTCACAGAGTTTGTCAAGTACCTCGGCCGCACGGGGAAATGCAAGGTTGACGGGACACCAAAAGGTTGGTTCATGACTTACACAGACCGAGATTCTGAAACCCTTTTAAAGGAGCGCCTTAAGAGCTTGAGCCTACGCCGTAGAGGAGGAGAAACAAGAGCAGGCGATCAGGAAACAGATTGA 438 0.5274 MCQKQCRDENGFKCHCMSESHQRQMEVFGQNPNRIVDGYSEEFELSFLEHVKRNHHFSRVAATVVYNEYIADRHQIHMNSTEWATLTEFVKYLGRTGKCKVDGTPKGWFMTYTDRDSETLLKERLKSLSLRRRGGETRAGDQETD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01758 145 SMART Kin17_mid_2 23 145 IPR019447 -
Eupl01g01758 145 FunFam DNA/RNA-binding protein KIN17, putative 32 131 - -
Eupl01g01758 145 Pfam Domain of Kin17 curved DNA-binding protein 23 126 IPR019447 -
Eupl01g01758 145 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 126 IPR037321 -
Eupl01g01758 145 Gene3D - 31 129 IPR038254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01758 Eupl-Chr1 39279992 39280429 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01758 1 127 C2H2 Transcription Factor Family AT1G55460 81.102 1.21e-78 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01758 K13102 - atr:18434109 239.965