Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01756 ATGGCCGGCAAAGGTGAAGGTCCAGCTATCGGAATAGACCTTGGCACTACCTACTCGTGTGTTGGAGTCTGGCAACACGATCGCGTTGAGATCATAGCCAATGATCAAGGAAACAGGACCACTCCTTCTTATGTTGCTTTCACGGATTCTGAGCGTTTGATCGGAGATGCGGCGAAGAACCAGGTCGCGATGAATCCGATCAACACTGTCTTCGATGCAAAGCGTTTGATTGGCAGGAGATTCAGTGATGCCACTGTCCAAAGCGACATCAAGTTATGGCCCTTCAAGGTCATTCCGGGCCCTGGTGACAAGCCCATGATCGTGGTCAATCACAAGGGCGAGGAGAAGCAGTTTGCTGCCGAGGAGATATCCTCCATGGTCCTAATGAAGATGCGTGAGATTGCCGAGGCTTTCCTCGGTTCCACTATCAAGAATGCTGTGGTTACTGTCCCTGCCTACTTCAATGACTCCCAGCGTCAGGCTACCAAGGATGCCGGTGTCATTGCTGGCCTCAACGTCATGAGAATCATCAACGAACCCACAGCTGCTGCCATTGCTTATGGTCTTGACAAGAAAGCGACCAGTGTTGGTGAGAAGAACATCCTCATCTTTGATCTTGGTGGTGGTACCTTTGATGTCTCCCTCCTCACCATTGAAGAGGGTATCTTTGAGGTGAAGGCCACTGCTGGAGACACCCACCTTGGAGGAGAGGACTTCGACAATCGGATGGTGAACCACTTTGTGCAGGAGTTCAAGAGGAAGAACAAGAAGGACATCAGTGGGAACCCTAGGGCTCTCCGGAGGCTGAGAACATCTTGTGAGAGGGCTAAGAGGACTCTCTCATCTACTGCTCAGACCACCATTGAGATTGATTCTTTGTTTGAGGGTATTGACTTCTACTCTACCATCACTCGTGCCAGATTCGAGGAGCTCAACATGGATCTCTTCAGAAAGTGTATGGAGCCTGTTGAGAAGTGTCTTAGGGATGCTAAGATGGACAAAAGCACCGTCCATGAAGTTGTCCTTGTTGGTGGATCCACTAGGATTCCCAAGGTTCAGCAGCTATTGCAGGATTTCTTCAATGGGAAGGAACTCTGCAAGAGCATCAACCCTGATGAGCCGTTGCTTATGGAGCTGCTGTCCAGGCTGCTATCCTGA 1158 0.5026 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPINTVFDAKRLIGRRFSDATVQSDIKLWPFKVIPGPGDKPMIVVNHKGEEKQFAAEEISSMVLMKMREIAEAFLGSTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSVGEKNILIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTSCERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHEVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEPLLMELLSRLLS* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01756 385 Coils Coil 384 385 - -
Eupl01g01756 385 FunFam Heat shock 70 kDa protein 197 260 - -
Eupl01g01756 385 Gene3D - 10 373 - -
Eupl01g01756 385 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Eupl01g01756 385 Pfam Hsp70 protein 9 373 IPR013126 GO:0005524|GO:0140662
Eupl01g01756 385 Gene3D Actin; Chain A, domain 4 235 318 - -
Eupl01g01756 385 Gene3D - 71 126 - -
Eupl01g01756 385 FunFam Heat shock protein 70 10 196 - -
Eupl01g01756 385 Gene3D - 192 366 - -
Eupl01g01756 385 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Eupl01g01756 385 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Eupl01g01756 385 CDD HSPA1-2_6-8-like_NBD 9 373 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 8 21 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 146 166 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 36 48 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 209 219 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 369 385 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 58 66 - -
Eupl01g01756 385 PRINTS 70kDa heat shock protein signature 337 353 - -
Eupl01g01756 385 PANTHER HEAT SHOCK PROTEIN 70KDA 9 373 IPR013126 GO:0005524|GO:0140662
Eupl01g01756 385 FunFam Heat shock 70 kDa protein 71 126 - -
Eupl01g01756 385 SUPERFAMILY Actin-like ATPase domain 198 373 IPR043129 -
Eupl01g01756 385 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Eupl01g01756 385 FunFam Heat shock 70 kDa 235 318 - -
Eupl01g01756 385 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01756 Eupl-Chr1 39220869 39223800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01756 1 375 Calmodulin-binding Proteins AT5G02500 93.867 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01756 K03283 - twl:119980853 729.169