Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01753 ATGGGCAGAAAAGCTGGTGGGCTGTACATAAACCCGAAGAAGTTCGGGACTCTGCGGAAACCTTGCATGAAGGAGATGTTAGCATTCCTCAATTGCTTGTCTCTCAACCAGAACAGTGACGAAAAGTGCCTTCGTCAGAAGGAACTCTTGGGTGCCTGCATGGATGCTCAGGTTGGTGCAGCCAATGCCGGACCGTTTCAGGGGGCCCCCCAACGTCGACAAGGGTTCTTGCAGTCTGAACAAGAACTGACTCGAAGTAGCTTGGATAATTCCATAATTCAGCTCATTCCGTCTTACAGATACACTACTAAAGAGGTGGGATTGGTTACGAGAGCTGAAGACAGAACATGTGGGCTGTTCTTGTGCGAGTTCAACGAAGGAGAGGAGTCTGAACAAGAACTGACTCGAAGTAGCTTGGATAATTCCATAATTCAGCTCATTCCGTCTTACAGATACACTACTAAAGAGGTGGGATTGGTTGCGAGAGCTGAAGACAGAACATGTGGGCTGTTCTTGTGCGAGTTCAACGAAGGAGAGGAGGTTCGAATTTTGCCTGAGTGCATGCACTATTTTCACCCCCCAGATAGGTGCTCCAAGGGAAGACTCTTGCCTTCAAAAATCATGTTGTTCCATTCCCTCTAA 642 0.4798 MGRKAGGLYINPKKFGTLRKPCMKEMLAFLNCLSLNQNSDEKCLRQKELLGACMDAQVGAANAGPFQGAPQRRQGFLQSEQELTRSSLDNSIIQLIPSYRYTTKEVGLVTRAEDRTCGLFLCEFNEGEESEQELTRSSLDNSIIQLIPSYRYTTKEVGLVARAEDRTCGLFLCEFNEGEEVRILPECMHYFHPPDRCSKGRLLPSKIMLFHSL* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01753 213 Pfam CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, 19 58 IPR031731 -
Eupl01g01753 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 202 IPR013083 -
Eupl01g01753 213 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 19 61 - -
Eupl01g01753 213 PANTHER 37S RIBOSOMAL PROTEIN MRP10, MITOCHONDRIAL 1 60 IPR017264 GO:0003735|GO:0032543
Eupl01g01753 213 SUPERFAMILY Cysteine alpha-hairpin motif 20 58 IPR009069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01753 Eupl-Chr1 39196590 39201959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01753 139 192 C3H Transcription Factor Family AT3G18930 40.000 3.67e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01753 - - vvi:100854232 110.923