Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g01752 ATGAAGAGAGGTCCTCTTCCTTTTGGTTTGGAGAGAAAATGGCTGATGCCTTTGATCGGAAGTTCTGTAGTTTCTATTGTTCTGCTTCTCATAGTAACCTTAGGGCAGGGAAAATCTTCTACCAGAACTGATTTCTCTTCTTTTCAACGGAAATCGACCCTTTCCGATCGGAATTTCGCTACCAACGGTGATCAATTAGGTCTTCCAAAGCTGCCGAGATTTGCTTACTTGATTTCCGGGACGAAGGGGGACGATCAACGGCTGAGACGAGTTCTGCAAGCAGTTTATCACCCTTGGAATTACTACCTGTTGCATCTTGACCTTGAAGCTTCATCGAATGAACGGCTTGAGCTGGCCAAGTATGTGAAATCGGATGCAGTTTTCCGTGAATTCAACAATGTACGGGTTGTGGGTAACGCAAATCTGGTTACATATAAGGGCCCTACGATGATCGCTTCTACGCTGCACGCTGTCGCGATTCTACTGAAGCAGGCTAAGGAGTGGGACTGGTTCATAAATCTCAGCGCGTCGGATTATCCCCTCATGTCCCAAGACGATCTTCTTCATATTTTCTCATACTTGCCTAGGGATCTGAACTTCCTGGAGCACACAAGTAATATTGGTTGGAAAGAGTATCAAAGAGCAAGGCCTATCATTATAGATCCAGGACTGTATCATTCAAAGAAGTCTGGTGTATTTTGGGCTAAAGAGAAAAGGGCTGTGCCTGCTTCTTTCAAGCTATTTGTTGGGTCTGCATGGGTGGTGCTTACGAAATCATTCCTGGAGTTCTGTGTGTGGGGCTGGGATAATCTCCCTCGCACCCTACTCATGTACTATACAAACTTCCTGTCATCCCCAGAGGGCTACTTCCACACTGTCATCTGCAATTCTAAGGACTACCAGAATACGACAGTCAACCACGACTTGCATTATATAATGTGGGATAACCCACCAAAGCAACATCCTATCACGCTGACATTGAAACATTTTGACGGGATGGTTGAGAGCGGAACCCCATTTGCACGTAAGTTTGCTAGGGACGATCCTGTTCTGGACAGGATTGATCGGGAACTCTTGAGGAGATCGGATGGCCGGTTTACACCTGGTGGATGGTGCATGGGGAATTCTATCCTAGGTAGAGATCCCTGCACTGTTTATGAGTATCCCAATGTTATTAAACCCACTTTTCTCGGGAAAGATTCTGAACCAGATCTCTGCGTCTGCAAATCTCTCACACAAATCGATCGTCAATCAGAGGAAATGGCTTCTGCAAATGCAATAGACACCAGGTACTTGGGAGACTTTCATAGTGGCTTTCACCAGAAACACTCTAATGCAGGTAGTGCTGTTTCATCTTCAAGTGGCTATGTTCACAGAATATGTGCAACTGCTTGTGAAAATATGCTGAGAGGAAACCATTTGGATGTCCAACAAGAGGATAGCAGTGTAGCAAAGAAGAAAAGAGTCTCACGAATTGTAGGCGGTGGACTTCGCCAGTTCAGTATTAAAGTTTGTAAGAAGGTTGAGAACAAGGGAAGAACCACGTACAGTGAGGTCGCAGATGAAATCATATCAGAATTTGCGGCAATGCACCATAGTACAGTTTCTCTGGATGAGTTTGACGAGAAGAACATACGACGAAGGGTGTATGATGCATTAAATGTTCTCATGGCGCTGAATATTATCACTAGAGACAAAAAGGAAATCCGGTGGAAGGGTCTTCCAAGTACGAACATAAAGGATATGGAAGAGCTAGAGGCACTACGTGTTAAACTGATGAGTAGGATCGAAAAGAAAGCAGCCTACTTGCAAGAGATAGAAGAACAAATTGCAGGTCTCCAGAGCCTGATGCTGCGGAATCAGCAATTGCACAAGTCAGGACATGCCCCTTCAGAAGGGTTTTCTTTGCCATTCATACTAGTTCAAGTATGTTTTCTGTTTATTCCATTTTCTATGCTTCATACTTATTGA 1971 0.4444 MKRGPLPFGLERKWLMPLIGSSVVSIVLLLIVTLGQGKSSTRTDFSSFQRKSTLSDRNFATNGDQLGLPKLPRFAYLISGTKGDDQRLRRVLQAVYHPWNYYLLHLDLEASSNERLELAKYVKSDAVFREFNNVRVVGNANLVTYKGPTMIASTLHAVAILLKQAKEWDWFINLSASDYPLMSQDDLLHIFSYLPRDLNFLEHTSNIGWKEYQRARPIIIDPGLYHSKKSGVFWAKEKRAVPASFKLFVGSAWVVLTKSFLEFCVWGWDNLPRTLLMYYTNFLSSPEGYFHTVICNSKDYQNTTVNHDLHYIMWDNPPKQHPITLTLKHFDGMVESGTPFARKFARDDPVLDRIDRELLRRSDGRFTPGGWCMGNSILGRDPCTVYEYPNVIKPTFLGKDSEPDLCVCKSLTQIDRQSEEMASANAIDTRYLGDFHSGFHQKHSNAGSAVSSSSGYVHRICATACENMLRGNHLDVQQEDSSVAKKKRVSRIVGGGLRQFSIKVCKKVENKGRTTYSEVADEIISEFAAMHHSTVSLDEFDEKNIRRRVYDALNVLMALNIITRDKKEIRWKGLPSTNIKDMEELEALRVKLMSRIEKKAAYLQEIEEQIAGLQSLMLRNQQLHKSGHAPSEGFSLPFILVQVCFLFIPFSMLHTY* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g01752 656 Pfam E2F/DP family winged-helix DNA-binding domain 496 573 IPR003316 GO:0005667|GO:0006355
Eupl01g01752 656 Pfam Transcription factor DP 581 642 IPR014889 -
Eupl01g01752 656 PANTHER GLYCOSYLTRANSFERASE 11 396 IPR044610 GO:0015020
Eupl01g01752 656 SUPERFAMILY "Winged helix" DNA-binding domain 495 574 IPR036390 -
Eupl01g01752 656 Gene3D Transcription factor DP 579 644 IPR038168 -
Eupl01g01752 656 SMART DP_2 580 655 IPR014889 -
Eupl01g01752 656 SUPERFAMILY E2F-DP heterodimerization region 580 642 IPR037241 -
Eupl01g01752 656 Gene3D - 486 578 IPR036388 -
Eupl01g01752 656 FunFam Transcription factor-like protein DPB 487 578 - -
Eupl01g01752 656 Pfam Core-2/I-Branching enzyme 74 332 IPR003406 GO:0016020|GO:0016757
Eupl01g01752 656 SMART E2F_TDP_2 492 573 IPR003316 GO:0005667|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g01752 Eupl-Chr1 39173326 39191708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g01752 10 402 Glycosyltransferase AT5G15050 57.895 7.48e-164 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Eupl01g01752 Branch 3.3e-69 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g01752 K20891 - nnu:104594569 672.544